RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 ZSCAN25Q6NSZ9 544 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 TATDN1Q6P1N9 297 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 EDC3Q96F86 508 aaKnown RBP26.57■■□□□ 1.84
HLA-F-228ENST00000486194 ZNF333Q96JL9 665 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 TMEM106CQ9BVX2 250 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 ADD2P35612 726 aa26.56■■□□□ 1.84
HLA-F-228ENST00000486194 MTMR2Q13614 643 aa26.56■■□□□ 1.84
HLA-F-228ENST00000486194 ECHDC1Q9NTX5 307 aa26.56■■□□□ 1.84
HLA-F-228ENST00000486194 USP17L10C9JJH3 530 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 ECM2O94769 699 aaPredicted RBP26.55■■□□□ 1.84
HLA-F-228ENST00000486194 CTGFP29279 349 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 GCLCP48506 637 aaPredicted RBP26.55■■□□□ 1.84
HLA-F-228ENST00000486194 RAET1EQ8TD07 263 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 MCM9Q9NXL9 1143 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 MYPNQ86TC9 1320 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 MYH1P12882 1939 aa26.55■■□□□ 1.84
HLA-F-228ENST00000486194 UBE3CQ15386 1083 aa26.54■■□□□ 1.84
HLA-F-228ENST00000486194 CERKLQ49MI3 558 aaPredicted RBP26.54■■□□□ 1.84
HLA-F-228ENST00000486194 TAOK2Q9UL54 1235 aa26.54■■□□□ 1.84
HLA-F-228ENST00000486194 LOC285556D6RIA3 1793 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 GH2P01242 217 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 JAG1P78504 1218 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 FAM110CQ1W6H9 321 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 LCORLQ8N3X6 602 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 CABP5Q9NP86 173 aa26.53■■□□□ 1.84
HLA-F-228ENST00000486194 IRX3P78415 501 aaPredicted RBP26.52■■□□□ 1.84
HLA-F-228ENST00000486194 ANKRD13CQ8N6S4 541 aa26.52■■□□□ 1.84
HLA-F-228ENST00000486194 ASCC2Q9H1I8 757 aaPredicted RBP26.52■■□□□ 1.84
HLA-F-228ENST00000486194 DCP1AQ9NPI6 582 aaPredicted RBP26.52■■□□□ 1.84
HLA-F-228ENST00000486194 ATP8A2Q9NTI2 1148 aa26.52■■□□□ 1.84
HLA-F-228ENST00000486194 ZSWIM8A7E2V4 1837 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 POTEFA5A3E0 1075 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 MBD4O95243 580 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 HOXA7P31268 230 aaPredicted RBP26.51■■□□□ 1.83
HLA-F-228ENST00000486194 PLCD1P51178 756 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 ABCB5Q2M3G0 1257 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 SH3TC2Q8TF17 1288 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 SDR42E1Q8WUS8 393 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 DDRGK1Q96HY6 314 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
HLA-F-228ENST00000486194 ARMT1Q9H993 441 aa26.51■■□□□ 1.83
HLA-F-228ENST00000486194 TNPO2O14787 897 aaKnown RBP26.5■■□□□ 1.83
HLA-F-228ENST00000486194 GRK4P32298 578 aa26.5■■□□□ 1.83
HLA-F-228ENST00000486194 USP17L2Q6R6M4 530 aa26.5■■□□□ 1.83
HLA-F-228ENST00000486194 AMOTL1Q8IY63 956 aa26.5■■□□□ 1.83
HLA-F-228ENST00000486194 PCDHB15Q9Y5E8 787 aa26.5■■□□□ 1.83
HLA-F-228ENST00000486194 PRKCZQ05513 592 aa26.49■■□□□ 1.83
HLA-F-228ENST00000486194 GABPAQ06546 454 aa26.49■■□□□ 1.83
HLA-F-228ENST00000486194 RAB3GAP1Q15042 981 aa26.49■■□□□ 1.83
HLA-F-228ENST00000486194 SHROOM1Q2M3G4 852 aaPredicted RBP26.49■■□□□ 1.83
HLA-F-228ENST00000486194 COA7Q96BR5 231 aa26.49■■□□□ 1.83
HLA-F-228ENST00000486194 DDX60LQ5H9U9 1706 aaKnown RBP26.48■■□□□ 1.83
HLA-F-228ENST00000486194 SHMT1P34896 483 aa26.48■■□□□ 1.83
HLA-F-228ENST00000486194 USP14P54578 494 aa26.48■■□□□ 1.83
HLA-F-228ENST00000486194 FEZ1Q99689 392 aa26.48■■□□□ 1.83
HLA-F-228ENST00000486194 SWAP70Q9UH65 585 aa26.48■■□□□ 1.83
HLA-F-228ENST00000486194 NAV1Q8NEY1 1877 aa26.48■■□□□ 1.83
HLA-F-228ENST00000486194 RBBP6Q7Z6E9 1792 aaKnown RBP26.48■■□□□ 1.83
HLA-F-228ENST00000486194 HTTP42858 3142 aa26.47■■□□□ 1.83
HLA-F-228ENST00000486194 SLAIN1Q8ND83 568 aa26.47■■□□□ 1.83
HLA-F-228ENST00000486194 GTF3C2Q8WUA4 911 aaPredicted RBP26.47■■□□□ 1.83
HLA-F-228ENST00000486194 UBXN2AP68543 259 aa26.46■■□□□ 1.83
HLA-F-228ENST00000486194 KBTBD3Q8NAB2 608 aa26.46■■□□□ 1.83
HLA-F-228ENST00000486194 C12orf42Q96LP6 360 aa26.46■■□□□ 1.83
HLA-F-228ENST00000486194 ZBTB47Q9UFB7 747 aaPredicted RBP26.46■■□□□ 1.83
HLA-F-228ENST00000486194 TTC41PQ6P2S7 1318 aa26.45■■□□□ 1.83
HLA-F-228ENST00000486194 ERC2O15083 957 aa26.45■■□□□ 1.82
HLA-F-228ENST00000486194 LRRFIP1Q32MZ4 808 aaKnown RBP26.45■■□□□ 1.82
HLA-F-228ENST00000486194 KIAA1683Q9H0B3 1180 aa26.45■■□□□ 1.82
HLA-F-228ENST00000486194 EMILIN3Q9NT22 766 aa26.45■■□□□ 1.82
HLA-F-228ENST00000486194 MORF4L1Q9UBU8 362 aa26.45■■□□□ 1.82
HLA-F-228ENST00000486194 BIN2Q9UBW5 565 aaPredicted RBP26.45■■□□□ 1.82
HLA-F-228ENST00000486194 PRKAB2O43741 272 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 EN2P19622 333 aaPredicted RBP26.44■■□□□ 1.82
HLA-F-228ENST00000486194 FLT3LGP49771 235 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 IRF5Q13568 498 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 SLFNL1Q499Z3 407 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 CRBNQ96SW2 442 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 GABRQQ9UN88 632 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 SLC4A4Q9Y6R1 1079 aa26.44■■□□□ 1.82
HLA-F-228ENST00000486194 MGAMO43451 1857 aa26.43■■□□□ 1.82
HLA-F-228ENST00000486194 MYCP01106 439 aaPredicted RBP26.43■■□□□ 1.82
HLA-F-228ENST00000486194 ZFYP08048 801 aaPredicted RBP26.43■■□□□ 1.82
HLA-F-228ENST00000486194 HERVK_113P62684 666 aa26.43■■□□□ 1.82
HLA-F-228ENST00000486194 AAMPQ13685 434 aa26.43■■□□□ 1.82
HLA-F-228ENST00000486194 PXYLP1Q8TE99 480 aa26.43■■□□□ 1.82
HLA-F-228ENST00000486194 P2RX7Q99572 595 aaKnown RBP26.43■■□□□ 1.82
HLA-F-228ENST00000486194 MPHOSPH10O00566 681 aaKnown RBP26.42■■□□□ 1.82
HLA-F-228ENST00000486194 ADCY3O60266 1144 aa26.42■■□□□ 1.82
HLA-F-228ENST00000486194 NKX2-3Q8TAU0 364 aa26.42■■□□□ 1.82
HLA-F-228ENST00000486194 PUS7LQ9H0K6 701 aaKnown RBP26.42■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L15C9J2P7 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L13C9JLJ4 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L11C9JVI0 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L18D6R9N7 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L22D6RA61 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L17D6RBQ6 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L19D6RCP7 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 USP17L20D6RJB6 530 aa26.41■■□□□ 1.82
HLA-F-228ENST00000486194 CYP2D6P10635 497 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms