RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ATP5JP18859 108 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 SCNN1DP51172 638 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 RBM5P52756 815 aaKnown RBP eCLIP6.83□□□□□ -1.32
COPS3-208ENST00000486032 GRIK5Q16478 980 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 MFSD14BQ5SR56 506 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 RSBN1LQ6PCB5 846 aaPredicted RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 ERICH6Q7L0X2 663 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 KIAA0825Q8IV33 1275 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 WDR66Q8TBY9 1149 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 COL25A1Q9BXS0 654 aaPredicted RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 PIH1D3Q9NQM4 214 aaKnown RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 PAG1Q9NWQ8 432 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
COPS3-208ENST00000486032 COL1A1P02452 1464 aaPredicted RBP6.83□□□□□ -1.32
COPS3-208ENST00000486032 AOX1Q06278 1338 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 FAM205AQ6ZU69 1335 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 SALL3Q9BXA9 1300 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 DDX11L8A8MPP1 907 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 SEMA3EO15041 775 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 LDHBP07195 334 aaKnown RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 PRDX5P30044 214 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 EPS15P42566 896 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 GMPSP49915 693 aaPredicted RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 C1QTNF8P60827 252 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 DACT2Q5SW24 774 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 STRIP1Q5VSL9 837 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 DZIP1Q86YF9 867 aaKnown RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 CERS5Q8N5B7 392 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 GALNT6Q8NCL4 622 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 PI4K2BQ8TCG2 481 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 TRPM4Q8TD43 1214 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 TBC1D22AQ8WUA7 517 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 HAUS7Q99871 368 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 FSD1Q9BTV5 496 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
COPS3-208ENST00000486032 PCDHAC2Q9Y5I4 1007 aa6.82□□□□□ -1.32
COPS3-208ENST00000486032 VIL1P09327 827 aaKnown RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 GSPT1P15170 499 aaKnown RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 TTF1Q15361 905 aaPredicted RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 SLFNL1Q499Z3 407 aa6.81□□□□□ -1.32
COPS3-208ENST00000486032 TTC22Q5TAA0 569 aa6.81□□□□□ -1.32
COPS3-208ENST00000486032 SPTY2D1Q68D10 685 aaPredicted RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 WHAMMQ8TF30 809 aa6.81□□□□□ -1.32
COPS3-208ENST00000486032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.81□□□□□ -1.32
COPS3-208ENST00000486032 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 USB1Q9BQ65 265 aaKnown RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 TAF1DQ9H5J8 278 aaPredicted RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 STAP2Q9UGK3 403 aa6.81□□□□□ -1.32
COPS3-208ENST00000486032 CNOT7Q9UIV1 285 aaKnown RBP6.81□□□□□ -1.32
COPS3-208ENST00000486032 HDAC9Q9UKV0 1011 aa6.81□□□□□ -1.32
COPS3-208ENST00000486032 AKAP11Q9UKA4 1901 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 H7C1D1 291 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 CHGBP05060 677 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 USP17L8P0C7I0 530 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 CYP7A1P22680 504 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 CRKP46108 304 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 HIRAP54198 1017 aaPredicted RBP6.8□□□□□ -1.32
COPS3-208ENST00000486032 MECOMQ03112 1051 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 MAP3K12Q12852 859 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 TBC1D10BQ4KMP7 808 aaPredicted RBP6.8□□□□□ -1.32
COPS3-208ENST00000486032 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
COPS3-208ENST00000486032 SLC9C2Q5TAH2 1124 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 NAA16Q6N069 864 aaPredicted RBP6.8□□□□□ -1.32
COPS3-208ENST00000486032 CNTROBQ8N137 903 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 GPC2Q8N158 579 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 ZGPATQ8N5A5 531 aaKnown RBP6.8□□□□□ -1.32
COPS3-208ENST00000486032 MAGEB6Q8N7X4 407 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 AGBL3Q8NEM8 1001 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 SCN4AP35499 1836 aa6.8□□□□□ -1.32
COPS3-208ENST00000486032 MYO3BQ8WXR4 1341 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 MYO5AQ9Y4I1 1855 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 TRAF5O00463 557 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 SDSP20132 328 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 RPS12P25398 132 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 FKBP1AP62942 108 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 NNTQ13423 1086 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 DLGAP5Q15398 846 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 KIF4BQ2VIQ3 1234 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 CFAP100Q494V2 611 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 MAP1SQ66K74 1059 aaPredicted RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 ZSCAN25Q6NSZ9 544 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 METTL3Q86U44 580 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 KBTBD3Q8NAB2 608 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 MIGA1Q8NAN2 632 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 EVI5LQ96CN4 794 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 NOL10Q9BSC4 688 aaKnown RBP6.79□□□□□ -1.32
COPS3-208ENST00000486032 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.32
COPS3-208ENST00000486032 GPRC5DQ9NZD1 345 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 HACL1Q9UJ83 578 aa6.79□□□□□ -1.32
COPS3-208ENST00000486032 CEP350Q5VT06 3117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 366.1 ms