RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PRAMEF27A3QJZ7 478 aa7.64□□□□□ -1.19
GCFC2-209ENST00000486016 WIPI1Q5MNZ9 446 aaPredicted RBP7.64□□□□□ -1.19
GCFC2-209ENST00000486016 RIN3Q8TB24 985 aa7.64□□□□□ -1.19
GCFC2-209ENST00000486016 SEMA3GQ9NS98 782 aa7.64□□□□□ -1.19
GCFC2-209ENST00000486016 PCDHB5Q9Y5E4 795 aa7.64□□□□□ -1.19
GCFC2-209ENST00000486016 MESP2Q0VG99 397 aa7.63□□□□□ -1.19
GCFC2-209ENST00000486016 LILRA6Q6PI73 481 aa7.63□□□□□ -1.19
GCFC2-209ENST00000486016 AGMOQ6ZNB7 445 aa7.63□□□□□ -1.19
GCFC2-209ENST00000486016 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
GCFC2-209ENST00000486016 ZP2Q05996 745 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 IKZF1Q13422 519 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 HID1Q8IV36 788 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 MFSD2AQ8NA29 543 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 LMCD1Q9NZU5 365 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
GCFC2-209ENST00000486016 ANKRD33BA6NCL7 494 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 PATL2C9JE40 543 aaKnown RBP7.61□□□□□ -1.19
GCFC2-209ENST00000486016 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
GCFC2-209ENST00000486016 SEPT6Q14141 434 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
GCFC2-209ENST00000486016 CILP2Q8IUL8 1156 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 TOX2Q96NM4 488 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 MIPEPQ99797 713 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 CTNND2Q9UQB3 1225 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 CAPN6Q9Y6Q1 641 aa7.61□□□□□ -1.19
GCFC2-209ENST00000486016 LRRC10BA6NIK2 292 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 PRRG2O14669 202 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 CFPP27918 469 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 GRK4P32298 578 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 LIG3P49916 1009 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 PRAMEF13Q5VWM6 474 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 HSPA12BQ96MM6 686 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 ATP13A1Q9HD20 1204 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
GCFC2-209ENST00000486016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.6□□□□□ -1.19
GCFC2-209ENST00000486016 NCANO14594 1321 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 ZNF503-AS2A6NEH8 195 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 ETF1P62495 437 aaKnown RBP7.59□□□□□ -1.19
GCFC2-209ENST00000486016 SFRP5Q5T4F7 317 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 LETMD1Q6P1Q0 360 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 SND1Q7KZF4 910 aaKnown RBP eCLIP7.59□□□□□ -1.19
GCFC2-209ENST00000486016 TJP2Q9UDY2 1190 aa7.59□□□□□ -1.19
GCFC2-209ENST00000486016 B8ZZF3 427 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 TFE3P19532 575 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 RAP1GAPP47736 663 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 FGD1P98174 961 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 NPAS4Q8IUM7 802 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 MFSD4AQ8N468 514 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
GCFC2-209ENST00000486016 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
GCFC2-209ENST00000486016 CTSHP09668 335 aa7.57□□□□□ -1.2
GCFC2-209ENST00000486016 MLANAQ16655 118 aa7.57□□□□□ -1.2
GCFC2-209ENST00000486016 FYB2Q5VWT5 728 aa7.57□□□□□ -1.2
GCFC2-209ENST00000486016 ZSWIM9Q86XI8 627 aa7.57□□□□□ -1.2
GCFC2-209ENST00000486016 CARS2Q9HA77 564 aaKnown RBP7.57□□□□□ -1.2
GCFC2-209ENST00000486016 DAB2P98082 770 aa7.56□□□□□ -1.2
GCFC2-209ENST00000486016 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
GCFC2-209ENST00000486016 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
GCFC2-209ENST00000486016 ZSCAN18Q8TBC5 510 aaPredicted RBP7.56□□□□□ -1.2
GCFC2-209ENST00000486016 PARP2Q9UGN5 583 aa7.56□□□□□ -1.2
GCFC2-209ENST00000486016 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
GCFC2-209ENST00000486016 TSPAN15O95858 294 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 ST13P50502 369 aaKnown RBP7.55□□□□□ -1.2
GCFC2-209ENST00000486016 CDKAL1Q5VV42 579 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 C1QL4Q86Z23 238 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 NOC4LQ9BVI4 516 aaKnown RBP7.55□□□□□ -1.2
GCFC2-209ENST00000486016 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 USP31Q70CQ4 1352 aa7.55□□□□□ -1.2
GCFC2-209ENST00000486016 H3BS24 57 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 BUD31P41223 144 aaPredicted RBP7.54□□□□□ -1.2
GCFC2-209ENST00000486016 TNK2Q07912 1038 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 SLC6A19Q695T7 634 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
GCFC2-209ENST00000486016 FBXO33Q7Z6M2 555 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 CDH24Q86UP0 819 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 MCATQ8IVS2 390 aaKnown RBP7.54□□□□□ -1.2
GCFC2-209ENST00000486016 LRRC56Q8IYG6 542 aaPredicted RBP7.54□□□□□ -1.2
GCFC2-209ENST00000486016 PHC3Q8NDX5 983 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 XAGE3Q8WTP9 111 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
GCFC2-209ENST00000486016 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 COX4I2Q96KJ9 171 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 MIR1-1HGQ9H1L0 117 aa7.54□□□□□ -1.2
GCFC2-209ENST00000486016 CBX7O95931 251 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 PGRP06401 933 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 GDNFP39905 211 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 AFMP43652 599 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 RPL6Q02878 288 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms