RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ABHD8Q96I13 439 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 TEPSINQ96N21 525 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 MTA3Q9BTC8 594 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
SND1-212ENST00000485871 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 SERPINB13Q9UIV8 391 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
SND1-212ENST00000485871 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 SH2B2O14492 632 aaPredicted RBP13.34□□□□□ -0.27
SND1-212ENST00000485871 LARGE1O95461 756 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
SND1-212ENST00000485871 VEGFBP49765 207 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
SND1-212ENST00000485871 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 SEC23AQ15436 765 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
SND1-212ENST00000485871 ESR2Q92731 530 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 VEZTQ9HBM0 779 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
SND1-212ENST00000485871 NOVP48745 357 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 RASA3Q14644 834 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 ANGEL2Q5VTE6 544 aaKnown RBP13.33□□□□□ -0.28
SND1-212ENST00000485871 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
SND1-212ENST00000485871 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
SND1-212ENST00000485871 TMEM39BQ9GZU3 492 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 GGA3Q9NZ52 723 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
SND1-212ENST00000485871 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 DOCK1Q14185 1865 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 FAM196BA6NMK8 535 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 EPHX2P34913 555 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 TNNI2P48788 182 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 CUL4AQ13619 759 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 TNFAIP1Q13829 316 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 ME3Q16798 604 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 TATDN1Q6P1N9 297 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 APOBEC3FQ8IUX4 373 aaKnown RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 BRF1Q92994 677 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 TOMM22Q9NS69 142 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 SCAF8Q9UPN6 1271 aaKnown RBP13.32□□□□□ -0.28
SND1-212ENST00000485871 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
SND1-212ENST00000485871 OTOFQ9HC10 1997 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 TBC1D12O60347 775 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
SND1-212ENST00000485871 LIFRP42702 1097 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 TFAP4Q01664 338 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 NBR1Q14596 966 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
SND1-212ENST00000485871 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
SND1-212ENST00000485871 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
SND1-212ENST00000485871 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 ZNF287Q9HBT7 754 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
SND1-212ENST00000485871 TNKSO95271 1327 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 NID2Q14112 1375 aa13.31□□□□□ -0.28
SND1-212ENST00000485871 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 NMT2O60551 498 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 AKR1B1P15121 316 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 TMEM67Q5HYA8 995 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 DEFB129Q9H1M3 183 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 MKNK2Q9HBH9 465 aa13.3□□□□□ -0.28
SND1-212ENST00000485871 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
SND1-212ENST00000485871 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms