RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TMOD4Q9NZQ9 345 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 STAP2Q9UGK3 403 aa15.02■□□□□ -0
PTCD1-205ENST00000485746 MYO5AQ9Y4I1 1855 aaKnown RBP15.01□□□□□ -0.01
PTCD1-205ENST00000485746 USP17L12C9JPN9 530 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 USP17L21D6R901 530 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 TLR2O60603 784 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 GH2P01242 217 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 CYP2D6P10635 497 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
PTCD1-205ENST00000485746 ABCB5Q2M3G0 1257 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 CD99L2Q8TCZ2 262 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 RILPL2Q969X0 211 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
PTCD1-205ENST00000485746 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 TRIM17Q9Y577 477 aa15.01□□□□□ -0.01
PTCD1-205ENST00000485746 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 CCDC85CA6NKD9 419 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 GPAA1O43292 621 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 GNAT2P19087 354 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 HMGCS2P54868 508 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 PABPC4Q13310 644 aaKnown RBP eCLIP15□□□□□ -0.01
PTCD1-205ENST00000485746 GPAT2Q6NUI2 795 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 DYNLL2Q96FJ2 89 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 FEZ1Q99689 392 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 WDR18Q9BV38 432 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 SWAP70Q9UH65 585 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 CPA4Q9UI42 421 aa15□□□□□ -0.01
PTCD1-205ENST00000485746 MINDY4BA8MYZ0 360 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 USP17L10C9JJH3 530 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 M0R2C6 588 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 ECM2O94769 699 aaPredicted RBP14.99□□□□□ -0.01
PTCD1-205ENST00000485746 OSBPP22059 807 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 SHMT1P34896 483 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 TDO2P48775 406 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 MTMR2Q13614 643 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 MOGSQ13724 837 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 SHROOM1Q2M3G4 852 aaPredicted RBP14.99□□□□□ -0.01
PTCD1-205ENST00000485746 PROCA1Q8NCQ7 364 aaPredicted RBP14.99□□□□□ -0.01
PTCD1-205ENST00000485746 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
PTCD1-205ENST00000485746 EFCC1Q9HA90 598 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
PTCD1-205ENST00000485746 CYP2D7A0A087X1C5 515 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 C19orf81C9J6K1 198 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 PATL2C9JE40 543 aaKnown RBP14.98□□□□□ -0.01
PTCD1-205ENST00000485746 CYP2C8P10632 490 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 BACE1P56817 501 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 JAG1P78504 1218 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 ZMYM1Q5SVZ6 1142 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 C12orf60Q5U649 245 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 CTR9Q6PD62 1173 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 STK11IPQ8N1F8 1099 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 SEC62Q99442 399 aaKnown RBP14.98□□□□□ -0.01
PTCD1-205ENST00000485746 NACAP1Q9BZK3 213 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
PTCD1-205ENST00000485746 SLC45A1Q9Y2W3 748 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 CASP8AP2Q9UKL3 1982 aa14.98□□□□□ -0.01
PTCD1-205ENST00000485746 GSG1L2A8MUP6 293 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 CDK8P49336 464 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 EVX2Q03828 476 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 GABPAQ06546 454 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 ZYXQ15942 572 aaKnown RBP14.97□□□□□ -0.01
PTCD1-205ENST00000485746 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 GIMAP6Q6P9H5 292 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 SLC44A5Q8NCS7 719 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
PTCD1-205ENST00000485746 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-205ENST00000485746 USP14P54578 494 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 IRX3P78415 501 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-205ENST00000485746 SEPT2Q15019 361 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-205ENST00000485746 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 OTOP1Q7RTM1 612 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 NAPBQ9H115 298 aa14.96□□□□□ -0.01
PTCD1-205ENST00000485746 SLC3A2P08195 630 aaKnown RBP14.95□□□□□ -0.02
PTCD1-205ENST00000485746 LACTBP83111 547 aaPredicted RBP14.95□□□□□ -0.02
PTCD1-205ENST00000485746 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 CCDC129Q6ZRS4 1044 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 TMEM179Q6ZVK1 233 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 C16orf86Q6ZW13 317 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 CCDC17Q96LX7 622 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 HELLSQ9NRZ9 838 aa14.95□□□□□ -0.02
PTCD1-205ENST00000485746 HOXD10P28358 340 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 PSMC4P43686 418 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 IFNL3Q8IZI9 196 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
PTCD1-205ENST00000485746 ASCC2Q9H1I8 757 aaPredicted RBP14.94□□□□□ -0.02
PTCD1-205ENST00000485746 OSBPL3Q9H4L5 887 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 ZNF287Q9HBT7 754 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 ARHGEF10LQ9HCE6 1279 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 HPS5Q9UPZ3 1129 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 DOCK1Q14185 1865 aa14.94□□□□□ -0.02
PTCD1-205ENST00000485746 AKR1B1P15121 316 aa14.93□□□□□ -0.02
PTCD1-205ENST00000485746 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms