RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 HERVK_113P62684 666 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 TRIM32Q13049 653 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 CCAR1Q8IX12 1150 aaKnown RBP16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 TRIB2Q92519 343 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 GDF11O95390 407 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 MAPK4P31152 587 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 BMP8BP34820 402 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 TNNI3KQ59H18 835 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 SZT2Q5T011 3432 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 TRMT44Q8IYL2 757 aaKnown RBP16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 P2RX7Q99572 595 aaKnown RBP16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 DNAJC18Q9H819 358 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 ZMYND8Q9ULU4 1186 aaPredicted RBP16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.28
SMARCD3-211ENST00000485592 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 SOX1O00570 391 aaPredicted RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 METTL16Q86W50 562 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 MIER1Q8N108 512 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 GDF15Q99988 308 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 DBNDD2Q9BQY9 259 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 OGDHLQ9ULD0 1010 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
SMARCD3-211ENST00000485592 MYH1P12882 1939 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 ERVK-9P63128 1117 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 ERVK-24P63145 666 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 ADGRA1Q86SQ6 560 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 TXNRD2Q9NNW7 524 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
SMARCD3-211ENST00000485592 BCAR3O75815 825 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 RGS2P41220 211 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 JAG1P78504 1218 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 POLA2Q14181 598 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 USP17L2Q6R6M4 530 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 CERS3Q8IU89 383 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 ZNF512BQ96KM6 892 aaPredicted RBP16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 PAGR1Q9BTK6 254 aa16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 RANBP2P49792 3224 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-211ENST00000485592 PEX10O60683 326 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 SYN1P17600 705 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 ZAP70P43403 619 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 FEZ1Q99689 392 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 APBA2Q99767 749 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 RBPJLQ9UBG7 517 aa16.79■□□□□ 0.28
SMARCD3-211ENST00000485592 CYP7A1P22680 504 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 USP5P45974 858 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 GPR153Q6NV75 609 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 PLEKHH3Q7Z736 793 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
SMARCD3-211ENST00000485592 PFASO15067 1338 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 GH2P01242 217 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 CCNA1P78396 465 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 Q3C1V9 767 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 MORN1Q5T089 497 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 TDHQ8IZJ6 230 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 USP6NLQ92738 828 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 PORCNQ9H237 461 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 EMILIN3Q9NT22 766 aa16.77■□□□□ 0.28
SMARCD3-211ENST00000485592 FRMPD3Q5JV73 1810 aa16.77■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 GLRX3O76003 335 aaKnown RBP16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP14P54578 494 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 ZYXQ15942 572 aaKnown RBP16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms