RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KDM4AO75164 1064 aa20.76■□□□□ 0.91
CHMP3-207ENST00000485465 USP2O75604 605 aaPredicted RBP20.76■□□□□ 0.91
CHMP3-207ENST00000485465 HMGB1P09429 215 aaKnown RBP20.76■□□□□ 0.91
CHMP3-207ENST00000485465 TFAP4Q01664 338 aa20.76■□□□□ 0.91
CHMP3-207ENST00000485465 PRKG1Q13976 671 aa20.76■□□□□ 0.91
CHMP3-207ENST00000485465 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
CHMP3-207ENST00000485465 FAM47AQ5JRC9 791 aa20.76■□□□□ 0.91
CHMP3-207ENST00000485465 FZD1Q9UP38 647 aa20.76■□□□□ 0.91
CHMP3-207ENST00000485465 TSPY2A6NKD2 308 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 AKR1B1P15121 316 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 CASTP20810 708 aaKnown RBP20.75■□□□□ 0.91
CHMP3-207ENST00000485465 BLOC1S2Q6QNY1 142 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 CYB5R4Q7L1T6 521 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 KLRG1Q96E93 195 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 ZNF408Q9H9D4 720 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 ZSWIM6Q9HCJ5 1215 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 ZSWIM5Q9P217 1185 aa20.75■□□□□ 0.91
CHMP3-207ENST00000485465 GDF11O95390 407 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 TSPY3P0CV98 308 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 TSPY8P0CW00 308 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 CAP2P40123 477 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 ABCB5Q2M3G0 1257 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 DHX32Q7L7V1 743 aaKnown RBP20.74■□□□□ 0.91
CHMP3-207ENST00000485465 NEDD1Q8NHV4 660 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 WRNIP1Q96S55 665 aa20.74■□□□□ 0.91
CHMP3-207ENST00000485465 MPHOSPH10O00566 681 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 CTNND1O60716 968 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 CELF2O95319 508 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 CPA1P15085 419 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 RPS6KB1P23443 525 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 MCM5P33992 734 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 IREB2P48200 963 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 ANTXR2P58335 489 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 JAG1P78504 1218 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 TTLL12Q14166 644 aaPredicted RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 RUFY3Q7L099 469 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 ANGEL1Q9UNK9 670 aaKnown RBP20.73■□□□□ 0.91
CHMP3-207ENST00000485465 CYP46A1Q9Y6A2 500 aa20.73■□□□□ 0.91
CHMP3-207ENST00000485465 PRC1O43663 620 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 INPP5BP32019 993 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 MAP3K9P80192 1104 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
CHMP3-207ENST00000485465 CHST3Q7LGC8 479 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 ARMC9Q7Z3E5 817 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHMP3-207ENST00000485465 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
CHMP3-207ENST00000485465 CABP5Q9NP86 173 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 TCP11L1Q9NUJ3 509 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 WDR19Q8NEZ3 1342 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 PASKQ96RG2 1323 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 PLIN4Q96Q06 1357 aa20.72■□□□□ 0.91
CHMP3-207ENST00000485465 GH2P01242 217 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 FKBP1BP68106 108 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 FSTL1Q12841 308 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 RABEP1Q15276 862 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 CST9Q5W186 159 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 TMEM179Q6ZVK1 233 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 MOB2Q70IA6 237 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 IQCA1Q86XH1 822 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
CHMP3-207ENST00000485465 GBA2Q9HCG7 927 aaPredicted RBP20.71■□□□□ 0.91
CHMP3-207ENST00000485465 GINM1Q9NU53 330 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 ZBTB21Q9ULJ3 1066 aa20.71■□□□□ 0.91
CHMP3-207ENST00000485465 IGKV6D-41A0A0C4DH26 115 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 GUCY1A2P33402 732 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 NOL9Q5SY16 702 aaKnown RBP20.7■□□□□ 0.9
CHMP3-207ENST00000485465 SCYL3Q8IZE3 742 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 C2orf69Q8N8R5 385 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 TCEANC2Q96MN5 208 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 ZSCAN10Q96SZ4 725 aaPredicted RBP20.7■□□□□ 0.9
CHMP3-207ENST00000485465 ZKSCAN3Q9BRR0 538 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 UBAC1Q9BSL1 405 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 MTA3Q9BTC8 594 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 IL17RBQ9NRM6 502 aa20.7■□□□□ 0.9
CHMP3-207ENST00000485465 MYH8P13535 1937 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 UBE2Q2LH0YL09 131 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 NMT2O60551 498 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 ASNSP08243 561 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 NEK4P51957 841 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 SEPT2Q15019 361 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 CCDC178Q5BJE1 867 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.69■□□□□ 0.9
CHMP3-207ENST00000485465 TMEM87BQ96K49 555 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
CHMP3-207ENST00000485465 PAPPA2Q9BXP8 1791 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 IFIT3O14879 490 aaKnown RBP20.68■□□□□ 0.9
CHMP3-207ENST00000485465 VGLL4Q14135 290 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 SART3Q15020 963 aaKnown RBP20.68■□□□□ 0.9
CHMP3-207ENST00000485465 RAB3GAP1Q15042 981 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 LDLRAD1Q5T700 205 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 ANKRD13AQ8IZ07 590 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 LRRC2Q9BYS8 371 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 KANSL2Q9H9L4 492 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 MTMR4Q9NYA4 1195 aa20.68■□□□□ 0.9
CHMP3-207ENST00000485465 CSADQ9Y600 493 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms