RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 AS3MTQ9HBK9 375 aa16.19■□□□□ 0.18
UBA3-210ENST00000485424 RBM27Q9P2N5 1060 aaKnown RBP16.19■□□□□ 0.18
UBA3-210ENST00000485424 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
UBA3-210ENST00000485424 RLFQ13129 1914 aa16.19■□□□□ 0.18
UBA3-210ENST00000485424 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
UBA3-210ENST00000485424 CAP2P40123 477 aa16.18■□□□□ 0.18
UBA3-210ENST00000485424 HMGCS2P54868 508 aa16.18■□□□□ 0.18
UBA3-210ENST00000485424 SPP2Q13103 211 aa16.18■□□□□ 0.18
UBA3-210ENST00000485424 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
UBA3-210ENST00000485424 ZNF280CQ8ND82 737 aa16.18■□□□□ 0.18
UBA3-210ENST00000485424 CCDC8Q9H0W5 538 aaPredicted RBP16.18■□□□□ 0.18
UBA3-210ENST00000485424 PAK6Q9NQU5 681 aaPredicted RBP16.18■□□□□ 0.18
UBA3-210ENST00000485424 PI4KBQ9UBF8 816 aa16.18■□□□□ 0.18
UBA3-210ENST00000485424 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
UBA3-210ENST00000485424 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 PLXNA1Q9UIW2 1896 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 IGSF3O75054 1194 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 RLBP1P12271 317 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 ZAP70P43403 619 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBA3-210ENST00000485424 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 TGFBRAP1Q8WUH2 860 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 COA7Q96BR5 231 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 DEFB118Q96PH6 123 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 PRO3102Q9H379 93 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
UBA3-210ENST00000485424 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
UBA3-210ENST00000485424 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
UBA3-210ENST00000485424 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
UBA3-210ENST00000485424 CYP2E1P05181 493 aaPredicted RBP16.16■□□□□ 0.18
UBA3-210ENST00000485424 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
UBA3-210ENST00000485424 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
UBA3-210ENST00000485424 ZNF512BQ96KM6 892 aaPredicted RBP16.16■□□□□ 0.18
UBA3-210ENST00000485424 CYP7A1P22680 504 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
UBA3-210ENST00000485424 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 ADGRA1Q86SQ6 560 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 CERS3Q8IU89 383 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
UBA3-210ENST00000485424 DBNLQ9UJU6 430 aaKnown RBP16.15■□□□□ 0.18
UBA3-210ENST00000485424 EXOC6BQ9Y2D4 811 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 NR2E3Q9Y5X4 410 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 FLT1P17948 1338 aa16.15■□□□□ 0.18
UBA3-210ENST00000485424 USP5P45974 858 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 PPP4CP60510 307 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 AACSQ86V21 672 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBA3-210ENST00000485424 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 TLR7Q9NYK1 1049 aaKnown RBP16.14■□□□□ 0.17
UBA3-210ENST00000485424 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 LTBP2Q14767 1821 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 ZNF236Q9UL36 1845 aa16.14■□□□□ 0.17
UBA3-210ENST00000485424 HMMRO75330 724 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 HMGCRP04035 888 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 ASNSP08243 561 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 CAPN2P17655 700 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 MTMR2Q13614 643 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 DIS3LQ8TF46 1054 aaKnown RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
UBA3-210ENST00000485424 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 PIH1D3Q9NQM4 214 aaKnown RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
UBA3-210ENST00000485424 EVI5O60447 810 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 JAG1P78504 1218 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
UBA3-210ENST00000485424 MAGEB6Q8N7X4 407 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 WDR18Q9BV38 432 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
UBA3-210ENST00000485424 APBB1O00213 710 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 BACE1P56817 501 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 DYNLL1P63167 89 aaKnown RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 TRIM32Q13049 653 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
UBA3-210ENST00000485424 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 A0A0C4DFX4 3053 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
UBA3-210ENST00000485424 GDF11O95390 407 aa16.1■□□□□ 0.17
UBA3-210ENST00000485424 EVX2Q03828 476 aa16.1■□□□□ 0.17
UBA3-210ENST00000485424 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
UBA3-210ENST00000485424 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
UBA3-210ENST00000485424 TRIB2Q92519 343 aa16.1■□□□□ 0.17
UBA3-210ENST00000485424 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
UBA3-210ENST00000485424 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 PEX10O60683 326 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
UBA3-210ENST00000485424 HOXA7P31268 230 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms