RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.09□□□□□ -0.63
NEB-213ENST00000484968 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
NEB-213ENST00000484968 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 TTC14Q96N46 770 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
NEB-213ENST00000484968 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 RANBP6O60518 1105 aaKnown RBP11.08□□□□□ -0.64
NEB-213ENST00000484968 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
NEB-213ENST00000484968 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
NEB-213ENST00000484968 RPS6KB1P23443 525 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
NEB-213ENST00000484968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEB-213ENST00000484968 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 NCOA7Q8NI08 942 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 IGDCC4Q8TDY8 1250 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
NEB-213ENST00000484968 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
NEB-213ENST00000484968 PRC1O43663 620 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 GH2P01242 217 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 CAP2P40123 477 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 NOVP48745 357 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 PDE4BQ07343 736 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
NEB-213ENST00000484968 SEPT2Q15019 361 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 SEC23AQ15436 765 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 SUPT20HL1Q3ZLR7 823 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
NEB-213ENST00000484968 RUFY3Q7L099 469 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
NEB-213ENST00000484968 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 RNF41Q9H4P4 317 aaPredicted RBP11.07□□□□□ -0.64
NEB-213ENST00000484968 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
NEB-213ENST00000484968 GREB1LQ9C091 1923 aaPredicted RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 A0A1W2PRG0 241 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 TOMM70O94826 608 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 PCP11498 1178 aaKnown RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 MCCP23508 829 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 KRT32Q14532 448 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 ENAHQ8N8S7 591 aaPredicted RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 ESR2Q92731 530 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 ZNF341Q9BYN7 854 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 KRT23Q9C075 422 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 ZNF408Q9H9D4 720 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 UPF2Q9HAU5 1272 aaKnown RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 BRPF3Q9ULD4 1205 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 ZBTB21Q9ULJ3 1066 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
NEB-213ENST00000484968 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
NEB-213ENST00000484968 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 SH2B2O14492 632 aaPredicted RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 CELF2O95319 508 aaKnown RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 MCM5P33992 734 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 NEK4P51957 841 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 VGLL4Q14135 290 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 Q6ZUG5 572 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 ZNF444Q8N0Y2 327 aaPredicted RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 ACER1Q8TDN7 264 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 ZSCAN10Q96SZ4 725 aaPredicted RBP11.05□□□□□ -0.64
NEB-213ENST00000484968 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 TCP11L1Q9NUJ3 509 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 MTMR4Q9NYA4 1195 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 TNKSO95271 1327 aa11.05□□□□□ -0.64
NEB-213ENST00000484968 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 MPHOSPH10O00566 681 aaKnown RBP11.04□□□□□ -0.64
NEB-213ENST00000484968 CTNND1O60716 968 aaKnown RBP11.04□□□□□ -0.64
NEB-213ENST00000484968 DTNBO60941 627 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 LARGE1O95461 756 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 TSPY3P0CV98 308 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 TSPY8P0CW00 308 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 PTPRAP18433 802 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 GJA5P36382 358 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 ECE1P42892 770 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 AK2P54819 239 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 MAP3K9P80192 1104 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 TRDNQ13061 729 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 DGKZQ13574 1117 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
NEB-213ENST00000484968 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
NEB-213ENST00000484968 SCYL3Q8IZE3 742 aa11.04□□□□□ -0.64
NEB-213ENST00000484968 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms