RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 GAL3ST3Q96A11 431 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 TNKS2Q9H2K2 1166 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 CST3P01034 146 aaPredicted RBP7.37□□□□□ -1.23
SMC4-215ENST00000484799 RNASE1P07998 156 aaKnown RBP7.37□□□□□ -1.23
SMC4-215ENST00000484799 GBP2P32456 591 aaPredicted RBP7.37□□□□□ -1.23
SMC4-215ENST00000484799 CDK8P49336 464 aa7.37□□□□□ -1.23
SMC4-215ENST00000484799 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
SMC4-215ENST00000484799 SLC6A19Q695T7 634 aa7.37□□□□□ -1.23
SMC4-215ENST00000484799 FAM214BQ7L5A3 538 aa7.37□□□□□ -1.23
SMC4-215ENST00000484799 COX4I2Q96KJ9 171 aa7.37□□□□□ -1.23
SMC4-215ENST00000484799 TLR6Q9Y2C9 796 aa7.37□□□□□ -1.23
SMC4-215ENST00000484799 USP31Q70CQ4 1352 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 TFE3P19532 575 aaPredicted RBP7.36□□□□□ -1.23
SMC4-215ENST00000484799 CAP2P40123 477 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 ETV3P41162 512 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 NKG7Q16617 165 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 CDH24Q86UP0 819 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 SPACA3Q8IXA5 215 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 HSPA12BQ96MM6 686 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 MBNL3Q9NUK0 354 aaKnown RBP7.36□□□□□ -1.23
SMC4-215ENST00000484799 LMCD1Q9NZU5 365 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 U3KQE9 123 aa7.36□□□□□ -1.23
SMC4-215ENST00000484799 MINDY4BA8MYZ0 360 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 GFRA2O00451 464 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 ITGB5P18084 799 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 PLCG1P19174 1290 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 YARSP54577 528 aaKnown RBP7.35□□□□□ -1.23
SMC4-215ENST00000484799 MLECQ14165 292 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 NKPD1Q17RQ9 610 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 DNAJC14Q6Y2X3 702 aaPredicted RBP7.35□□□□□ -1.23
SMC4-215ENST00000484799 FAM168AQ92567 244 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 SYTL4Q96C24 671 aaPredicted RBP7.35□□□□□ -1.23
SMC4-215ENST00000484799 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 CRELD1Q96HD1 420 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 ZSWIM5Q9P217 1185 aa7.35□□□□□ -1.23
SMC4-215ENST00000484799 H3BS24 57 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 KIR3DL1P43629 444 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 AFMP43652 599 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 TNNI2P48788 182 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 CAMK2GQ13555 558 aaPredicted RBP7.34□□□□□ -1.23
SMC4-215ENST00000484799 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.23
SMC4-215ENST00000484799 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 PRDM7Q9NQW5 492 aa7.34□□□□□ -1.23
SMC4-215ENST00000484799 F6X3S4 739 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 PF4P02776 101 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 PKN1Q16512 942 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 MCATQ8IVS2 390 aaKnown RBP7.33□□□□□ -1.24
SMC4-215ENST00000484799 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
SMC4-215ENST00000484799 FAM13CQ8NE31 585 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 DPH2Q9BQC3 489 aaPredicted RBP7.33□□□□□ -1.24
SMC4-215ENST00000484799 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 CARS2Q9HA77 564 aaKnown RBP7.33□□□□□ -1.24
SMC4-215ENST00000484799 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 ADAM30Q9UKF2 790 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 KCNH3Q9ULD8 1083 aa7.33□□□□□ -1.24
SMC4-215ENST00000484799 LMNB2Q03252 620 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 KCNMB1Q16558 191 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 OGFOD2Q6N063 350 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 FBXO33Q7Z6M2 555 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 PHC3Q8NDX5 983 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 TMEM40Q8WWA1 233 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 ATP13A1Q9HD20 1204 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 CEP131Q9UPN4 1083 aa7.32□□□□□ -1.24
SMC4-215ENST00000484799 PITPNM2Q9BZ72 1349 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 ZBTB7CA1YPR0 619 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 PRR33A8MZF0 331 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 PAPLNO95428 1278 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 ZNF865P0CJ78 1059 aaPredicted RBP7.31□□□□□ -1.24
SMC4-215ENST00000484799 BNC2Q6ZN30 1099 aaPredicted RBP7.31□□□□□ -1.24
SMC4-215ENST00000484799 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 SLC38A3Q99624 504 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 TRIT1Q9H3H1 467 aaKnown RBP7.31□□□□□ -1.24
SMC4-215ENST00000484799 FAM53CQ9NYF3 392 aa7.31□□□□□ -1.24
SMC4-215ENST00000484799 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.3□□□□□ -1.24
SMC4-215ENST00000484799 FARP2O94887 1054 aaPredicted RBP7.3□□□□□ -1.24
SMC4-215ENST00000484799 CTSHP09668 335 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 THAP5Q7Z6K1 395 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 GOLM1Q8NBJ4 401 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 CAPN6Q9Y6Q1 641 aa7.3□□□□□ -1.24
SMC4-215ENST00000484799 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 RAC2P15153 192 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 FAM160A1Q05DH4 1040 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 WFDC3Q8IUB2 231 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 PHACTR4Q8IZ21 702 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 PIWIL2Q8TC59 973 aaKnown RBP7.29□□□□□ -1.24
SMC4-215ENST00000484799 GPATCH2Q9NW75 528 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 KLHL3Q9UH77 587 aa7.29□□□□□ -1.24
SMC4-215ENST00000484799 CILPO75339 1184 aa7.28□□□□□ -1.24
SMC4-215ENST00000484799 F13A1P00488 732 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms