RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 MFSD14CQ5VZR4 134 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 SH3RF1Q7Z6J0 888 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 PPM1EQ8WY54 764 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 PDLIM7Q9NR12 457 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 TMOD4Q9NZQ9 345 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 SIPA1L1O43166 1804 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 MROH7-TTC4A0A0A0MT08 1334 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 RHBDL3P58872 404 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 MAP2K5Q13163 448 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 POTEEQ6S8J3 1075 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 ATG9AQ7Z3C6 839 aa22.41■■□□□ 1.18
DDR1-245ENST00000484556 RNPC3Q96LT9 517 aaKnown RBP22.41■■□□□ 1.18
DDR1-245ENST00000484556 RFX5P48382 616 aaPredicted RBP22.4■■□□□ 1.18
DDR1-245ENST00000484556 BACE1P56817 501 aa22.4■■□□□ 1.18
DDR1-245ENST00000484556 SLC39A5Q6ZMH5 540 aa22.4■■□□□ 1.18
DDR1-245ENST00000484556 ZGPATQ8N5A5 531 aaKnown RBP22.4■■□□□ 1.18
DDR1-245ENST00000484556 ADAMTS19Q8TE59 1207 aa22.4■■□□□ 1.18
DDR1-245ENST00000484556 EDC3Q96F86 508 aaKnown RBP22.4■■□□□ 1.18
DDR1-245ENST00000484556 TRIM43BA6NCK2 446 aa22.39■■□□□ 1.17
DDR1-245ENST00000484556 SEMA3EO15041 775 aa22.39■■□□□ 1.17
DDR1-245ENST00000484556 TRPV1Q8NER1 839 aa22.39■■□□□ 1.17
DDR1-245ENST00000484556 TRIM43Q96BQ3 446 aaPredicted RBP22.39■■□□□ 1.17
DDR1-245ENST00000484556 SIL1Q9H173 461 aa22.39■■□□□ 1.17
DDR1-245ENST00000484556 MSCO60682 206 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 MYCNP04198 464 aaPredicted RBP22.38■■□□□ 1.17
DDR1-245ENST00000484556 ADORA1P30542 326 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 CYP2C19P33261 490 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 EPHB4P54760 987 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 JAG1P78504 1218 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 SHROOM1Q2M3G4 852 aaPredicted RBP22.38■■□□□ 1.17
DDR1-245ENST00000484556 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
DDR1-245ENST00000484556 WDR78Q5VTH9 848 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 ANO1Q5XXA6 986 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 SLF2Q8IX21 1173 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 FAM163AQ96GL9 167 aaPredicted RBP22.38■■□□□ 1.17
DDR1-245ENST00000484556 WDR18Q9BV38 432 aa22.38■■□□□ 1.17
DDR1-245ENST00000484556 DNAJB2P25686 324 aa22.37■■□□□ 1.17
DDR1-245ENST00000484556 RASGRF1Q13972 1273 aa22.37■■□□□ 1.17
DDR1-245ENST00000484556 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
DDR1-245ENST00000484556 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 ITGB8P26012 769 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 MECOMQ03112 1051 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 ZNF384Q8TF68 577 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 ASB2Q96Q27 587 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 UHRF1Q96T88 793 aaPredicted RBP22.36■■□□□ 1.17
DDR1-245ENST00000484556 THEGQ9P2T0 379 aa22.36■■□□□ 1.17
DDR1-245ENST00000484556 KBTBD13C9JR72 458 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 ATP2B2Q01814 1243 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 SNX17Q15036 470 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 CCDC102BQ68D86 513 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 NPLOC4Q8TAT6 608 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 ATXN2LQ8WWM7 1075 aaKnown RBP22.35■■□□□ 1.17
DDR1-245ENST00000484556 ZNF576Q9H609 170 aa22.35■■□□□ 1.17
DDR1-245ENST00000484556 BDP1A6H8Y1 2624 aa22.34■■□□□ 1.17
DDR1-245ENST00000484556 NPM3O75607 178 aaKnown RBP22.34■■□□□ 1.17
DDR1-245ENST00000484556 CNMDO75829 334 aa22.34■■□□□ 1.17
DDR1-245ENST00000484556 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
DDR1-245ENST00000484556 USP17L10C9JJH3 530 aa22.33■■□□□ 1.17
DDR1-245ENST00000484556 GDF11O95390 407 aa22.33■■□□□ 1.17
DDR1-245ENST00000484556 CYBAP13498 195 aa22.33■■□□□ 1.17
DDR1-245ENST00000484556 ARRDC4Q8NCT1 418 aa22.33■■□□□ 1.17
DDR1-245ENST00000484556 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
DDR1-245ENST00000484556 CEP126Q9P2H0 1117 aa22.33■■□□□ 1.17
DDR1-245ENST00000484556 HERC5Q9UII4 1024 aaKnown RBP22.33■■□□□ 1.17
DDR1-245ENST00000484556 C19orf81C9J6K1 198 aa22.32■■□□□ 1.16
DDR1-245ENST00000484556 GLRX3O76003 335 aaKnown RBP22.32■■□□□ 1.16
DDR1-245ENST00000484556 ASNSP08243 561 aa22.32■■□□□ 1.16
DDR1-245ENST00000484556 PTPREP23469 700 aa22.32■■□□□ 1.16
DDR1-245ENST00000484556 ADCYAP1R1P41586 468 aa22.32■■□□□ 1.16
DDR1-245ENST00000484556 SPTY2D1Q68D10 685 aaPredicted RBP22.32■■□□□ 1.16
DDR1-245ENST00000484556 NCOR1O75376 2440 aa22.32■■□□□ 1.16
DDR1-245ENST00000484556 SLC15A5A6NIM6 579 aa22.31■■□□□ 1.16
DDR1-245ENST00000484556 TLE2Q04725 743 aa22.31■■□□□ 1.16
DDR1-245ENST00000484556 CCDC184Q52MB2 194 aa22.31■■□□□ 1.16
DDR1-245ENST00000484556 GAS2L1Q99501 681 aaPredicted RBP22.31■■□□□ 1.16
DDR1-245ENST00000484556 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
DDR1-245ENST00000484556 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
DDR1-245ENST00000484556 TCF20Q9UGU0 1960 aaKnown RBP22.3■■□□□ 1.16
DDR1-245ENST00000484556 CCDC85BQ15834 202 aaPredicted RBP22.3■■□□□ 1.16
DDR1-245ENST00000484556 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
DDR1-245ENST00000484556 TIFAQ96CG3 184 aa22.3■■□□□ 1.16
DDR1-245ENST00000484556 NECAB3Q96P71 396 aaPredicted RBP22.3■■□□□ 1.16
DDR1-245ENST00000484556 DNAJC18Q9H819 358 aa22.3■■□□□ 1.16
DDR1-245ENST00000484556 RABGAP1Q9Y3P9 1069 aa22.3■■□□□ 1.16
DDR1-245ENST00000484556 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
DDR1-245ENST00000484556 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
DDR1-245ENST00000484556 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
DDR1-245ENST00000484556 HOXC6P09630 235 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 CCNA1P78396 465 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 MRPS5P82675 430 aaKnown RBP22.29■■□□□ 1.16
DDR1-245ENST00000484556 GRB14Q14449 540 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 WDR63Q8IWG1 891 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 TEX11Q8IYF3 940 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 PRDM12Q9H4Q4 367 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 ZBTB21Q9ULJ3 1066 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 IVNS1ABPQ9Y6Y0 642 aa22.29■■□□□ 1.16
DDR1-245ENST00000484556 PDS5AQ29RF7 1337 aaKnown RBP22.29■■□□□ 1.16
DDR1-245ENST00000484556 CIAO1O76071 339 aa22.28■■□□□ 1.16
DDR1-245ENST00000484556 ZYXQ15942 572 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms