RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 FGD1P98174 961 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 ZNF124Q15973 351 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 LETMD1Q6P1Q0 360 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 AGMOQ6ZNB7 445 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 CAPN6Q9Y6Q1 641 aa8.36□□□□□ -1.07
SCAF11-207ENST00000484275 ZNF503-AS2A6NEH8 195 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 CST3P01034 146 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-207ENST00000484275 LIG3P49916 1009 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 MFSD4AQ8N468 514 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 CARS2Q9HA77 564 aaKnown RBP8.35□□□□□ -1.07
SCAF11-207ENST00000484275 ST14Q9Y5Y6 855 aa8.35□□□□□ -1.07
SCAF11-207ENST00000484275 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-207ENST00000484275 H3BS24 57 aa8.34□□□□□ -1.07
SCAF11-207ENST00000484275 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-207ENST00000484275 ZSWIM9Q86XI8 627 aa8.34□□□□□ -1.07
SCAF11-207ENST00000484275 C19orf73Q9NVV2 129 aa8.34□□□□□ -1.07
SCAF11-207ENST00000484275 LMCD1Q9NZU5 365 aa8.34□□□□□ -1.07
SCAF11-207ENST00000484275 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-207ENST00000484275 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-207ENST00000484275 DPH2Q9BQC3 489 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-207ENST00000484275 TJP2Q9UDY2 1190 aa8.33□□□□□ -1.08
SCAF11-207ENST00000484275 CBX7O95931 251 aa8.32□□□□□ -1.08
SCAF11-207ENST00000484275 MESP2Q0VG99 397 aa8.32□□□□□ -1.08
SCAF11-207ENST00000484275 EAPPQ56P03 285 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-207ENST00000484275 PARP2Q9UGN5 583 aa8.32□□□□□ -1.08
SCAF11-207ENST00000484275 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
SCAF11-207ENST00000484275 SND1Q7KZF4 910 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCAF11-207ENST00000484275 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
SCAF11-207ENST00000484275 MRPL41Q8IXM3 137 aaKnown RBP8.31□□□□□ -1.08
SCAF11-207ENST00000484275 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
SCAF11-207ENST00000484275 CTSHP09668 335 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 TNK2Q07912 1038 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 KCNMB1Q16558 191 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 LIN37Q96GY3 246 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-207ENST00000484275 TMEM87BQ96K49 555 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 MIR1-1HGQ9H1L0 117 aa8.3□□□□□ -1.08
SCAF11-207ENST00000484275 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
SCAF11-207ENST00000484275 PGRP06401 933 aa8.29□□□□□ -1.08
SCAF11-207ENST00000484275 LMNB1P20700 586 aa8.29□□□□□ -1.08
SCAF11-207ENST00000484275 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
SCAF11-207ENST00000484275 UBE2FQ969M7 185 aa8.29□□□□□ -1.08
SCAF11-207ENST00000484275 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
SCAF11-207ENST00000484275 LRRC10BA6NIK2 292 aa8.28□□□□□ -1.08
SCAF11-207ENST00000484275 DAB2P98082 770 aa8.28□□□□□ -1.08
SCAF11-207ENST00000484275 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
SCAF11-207ENST00000484275 ZNF746Q6NUN9 644 aaPredicted RBP8.28□□□□□ -1.08
SCAF11-207ENST00000484275 ACSF2Q96CM8 615 aaPredicted RBP8.28□□□□□ -1.08
SCAF11-207ENST00000484275 WASH4PA8MWX3 477 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 AFMP43652 599 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 RPL6Q02878 288 aaKnown RBP8.27□□□□□ -1.09
SCAF11-207ENST00000484275 MLANAQ16655 118 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 SLC6A19Q695T7 634 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 THAP5Q7Z6K1 395 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 PHC3Q8NDX5 983 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 DNAJB8Q8NHS0 232 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-207ENST00000484275 Q96M66 194 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.09
SCAF11-207ENST00000484275 F6X3S4 739 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 GDNFP39905 211 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 KIR3DL1P43629 444 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 TAF1CQ15572 869 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-207ENST00000484275 LCE1DQ5T752 114 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 AEBP1Q8IUX7 1158 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 MCATQ8IVS2 390 aaKnown RBP8.26□□□□□ -1.09
SCAF11-207ENST00000484275 KSR1Q8IVT5 923 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 PPP1R13LQ8WUF5 828 aa8.26□□□□□ -1.09
SCAF11-207ENST00000484275 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
SCAF11-207ENST00000484275 DBX1A6NMT0 343 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 ESR1P03372 595 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 CYP7A1P22680 504 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 ST13P50502 369 aaKnown RBP8.25□□□□□ -1.09
SCAF11-207ENST00000484275 PSMD2Q13200 908 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 BNC2Q6ZN30 1099 aaPredicted RBP8.25□□□□□ -1.09
SCAF11-207ENST00000484275 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 FAM84AQ96KN4 292 aa8.25□□□□□ -1.09
SCAF11-207ENST00000484275 USP31Q70CQ4 1352 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 UPK3BL1B0FP48 263 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 UPK3BL2E5RIL1 263 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 GLI1P08151 1106 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 TAGLNQ01995 201 aaKnown RBP8.24□□□□□ -1.09
SCAF11-207ENST00000484275 PRR23BQ6ZRT6 265 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 FBXO33Q7Z6M2 555 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 COX4I2Q96KJ9 171 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 ADAM30Q9UKF2 790 aa8.24□□□□□ -1.09
SCAF11-207ENST00000484275 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 FAM221AA4D161 298 aa8.23□□□□□ -1.09
SCAF11-207ENST00000484275 PDE4BQ07343 736 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms