RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 FAM205AQ6ZU69 1335 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 ADM5C9JUS6 153 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 CIAO1O76071 339 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 FSHRP23945 695 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 GRM5P41594 1212 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 RARSP54136 660 aaKnown RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 HDLBPQ00341 1268 aaKnown RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 GRM1Q13255 1194 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 ARMC9Q7Z3E5 817 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 KIAA0825Q8IV33 1275 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 ANKRD44Q8N8A2 993 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 KAZALD1Q96I82 304 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 KCTD15Q96SI1 283 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 MRIQ9BWK5 157 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 GNL3LQ9NVN8 582 aaKnown RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 NOB1Q9ULX3 412 aaKnown RBP7.66□□□□□ -1.18
PTCD3-215ENST00000484203 MAST3O60307 1309 aa7.66□□□□□ -1.18
PTCD3-215ENST00000484203 WTIPA6NIX2 430 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 EYA2O00167 538 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 PPP1R12BO60237 982 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 COL1A1P02452 1464 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 SLC5A1P13866 664 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 KLRK1P26718 216 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 IL15P40933 162 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 FMR1Q06787 632 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 NR5A1Q13285 461 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 NNTQ13423 1086 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 MFSD14BQ5SR56 506 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 INTS3Q68E01 1043 aaKnown RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 FBXO33Q7Z6M2 555 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 DDX60Q8IY21 1712 aaKnown RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 WDR66Q8TBY9 1149 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 LPIN2Q92539 896 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 HPS1Q92902 700 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 HOOK2Q96ED9 719 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 ZBED3Q96IU2 234 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 FAM84BQ96KN1 310 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-215ENST00000484203 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 IRS2Q9Y4H2 1338 aa7.65□□□□□ -1.18
PTCD3-215ENST00000484203 LAMB2P55268 1798 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 HSPA8P11142 646 aaKnown RBP7.64□□□□□ -1.19
PTCD3-215ENST00000484203 TNNI2P48788 182 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 RBM5P52756 815 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTCD3-215ENST00000484203 LBX1P52954 281 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 INHBEP58166 350 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-215ENST00000484203 SREBF2Q12772 1141 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 DEFB129Q9H1M3 183 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 AAASQ9NRG9 546 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 AKAP2Q9Y2D5 859 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 CCDC88AQ3V6T2 1871 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 LTBP1Q14766 1721 aa7.64□□□□□ -1.19
PTCD3-215ENST00000484203 SNAP23O00161 211 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 AOC2O75106 756 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 AVPP01185 164 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 GYG1P46976 350 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 RAB15P59190 212 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTCD3-215ENST00000484203 PTPN12Q05209 780 aaKnown RBP7.63□□□□□ -1.19
PTCD3-215ENST00000484203 MTX1Q13505 466 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 CTC1Q2NKJ3 1217 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 CFAP100Q494V2 611 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 FKBP1CQ5VVH2 108 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 ZKSCAN2Q63HK3 967 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 ZGPATQ8N5A5 531 aaKnown RBP7.63□□□□□ -1.19
PTCD3-215ENST00000484203 CERS5Q8N5B7 392 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 VGLL2Q8N8G2 317 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 TEKT1Q969V4 418 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 MXD3Q9BW11 206 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
PTCD3-215ENST00000484203 COPRSQ9NQ92 184 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 TMOD2Q9NZR1 351 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
PTCD3-215ENST00000484203 CACNA1SQ13698 1873 aa7.63□□□□□ -1.19
PTCD3-215ENST00000484203 ASTN2O75129 1339 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 A6NJR5 290 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 FAM155AB1AL88 458 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 IGSF3O75054 1194 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 GNAI2P04899 355 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 NR3C2P08235 984 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 FGFR2P21802 821 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 RFX5P48382 616 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 KIF23Q02241 960 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 SEMA3FQ13275 785 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 ATP2B3Q16720 1220 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 LRRC24Q50LG9 513 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
PTCD3-215ENST00000484203 CCDC116Q8IYX3 515 aa7.62□□□□□ -1.19
PTCD3-215ENST00000484203 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms