RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PDE4CQ08493 712 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 NAA15Q9BXJ9 866 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 A0A087X0B3 334 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 CTAGE9A4FU28 777 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 POTEB2H3BUK9 544 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 CASP8Q14790 479 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 MSL3Q8N5Y2 521 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 CSRNP2Q9H175 543 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 PIH1D3Q9NQM4 214 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 LAMB4A4D0S4 1761 aa22.47■■□□□ 1.19
RPUSD3-216ENST00000484134 CUL4BQ13620 913 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 SPATA1Q5VX52 437 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 NOA1Q8NC60 698 aaKnown RBP22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 ZSWIM5Q9P217 1185 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 STK36Q9NRP7 1315 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 PHACTR2O75167 634 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 GYPCP04921 128 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 LEKR1Q6ZMV7 388 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 SMYD4Q8IYR2 804 aaPredicted RBP22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 CMTR1Q8N1G2 835 aaKnown RBP22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 CCDC82Q8N4S0 544 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 OXER1Q8TDS5 423 aa22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 SRPRBQ9Y5M8 271 aaKnown RBP22.46■■□□□ 1.19
RPUSD3-216ENST00000484134 AKAP11Q9UKA4 1901 aa22.45■■□□□ 1.19
RPUSD3-216ENST00000484134 MYO5AQ9Y4I1 1855 aaKnown RBP22.45■■□□□ 1.19
RPUSD3-216ENST00000484134 RNF225M0QZC1 329 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 ERLIN1O75477 346 aa22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 TNNT3P45378 269 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 NOP2P46087 812 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 CDKAL1Q5VV42 579 aa22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 ZNF579Q8NAF0 562 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 LRRIQ3A6PVS8 624 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 COBLO75128 1261 aa22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 SLC12A7Q9Y666 1083 aa22.45■■□□□ 1.18
RPUSD3-216ENST00000484134 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 IFNAR1P17181 557 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 ARHGAP25P42331 645 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 AFMP43652 599 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 ERVK-24P63145 666 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 ZNF532Q9HCE3 1301 aa22.44■■□□□ 1.18
RPUSD3-216ENST00000484134 IFIT3O14879 490 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 RPS6KA5O75582 802 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 EIF3JO75822 258 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 IDH1O75874 414 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 CTDSPL2Q05D32 466 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 RILPL1Q5EBL4 403 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 PKD1L3Q7Z443 1732 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 MYH8P13535 1937 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 CSB-PGBD3P0DP91 1061 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 SAFBQ15424 915 aaKnown RBP eCLIP22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 EPSTI1Q96J88 318 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 SYNRGQ9UMZ2 1314 aa22.43■■□□□ 1.18
RPUSD3-216ENST00000484134 IVLP07476 585 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 FECHP22830 423 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CDC25AP30304 524 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 LIFRP42702 1097 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 TUBB2AQ13885 445 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 KANK3Q6NY19 840 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CCDC102AQ96A19 550 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 TUBB2BQ9BVA1 445 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 FOXP1Q9H334 677 aaPredicted RBP22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 ABCC12Q96J65 1359 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CTAGE15A4D2H0 777 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CTAGE8P0CG41 777 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 DPYDQ12882 1025 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CTAGE6Q86UF2 777 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 CTAGE4Q8IX94 777 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 NAPGQ99747 312 aaPredicted RBP22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 STRN4Q9NRL3 753 aa22.42■■□□□ 1.18
RPUSD3-216ENST00000484134 FAM205CA6NFA0 338 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 PPP1R3GB7ZBB8 358 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 NCAPH2Q6IBW4 605 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 LRRC31Q6UY01 552 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 SYNE4Q8N205 404 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 STRBPQ96SI9 672 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 ISCA1Q9BUE6 129 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 RIC1Q4ADV7 1423 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 TAF7LQ5H9L4 462 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 EPB41L4AQ9HCS5 686 aaPredicted RBP22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 CABP5Q9NP86 173 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 FBXO3Q9UK99 471 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 TTF2Q9UNY4 1162 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 ATRNO75882 1429 aa22.41■■□□□ 1.18
RPUSD3-216ENST00000484134 PDE6AP16499 860 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 AMPD2Q01433 879 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 WHAMMP3Q1A5X7 153 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 PAGE5Q96GU1 130 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 ZKSCAN3Q9BRR0 538 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 EFCC1Q9HA90 598 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 MST1RQ04912 1400 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 CCT6AP40227 531 aaKnown RBP22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 UBE3CQ15386 1083 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 SH3RF1Q7Z6J0 888 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 FAM71BQ8TC56 605 aa22.4■■□□□ 1.18
RPUSD3-216ENST00000484134 SHISA4Q96DD7 197 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms