RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 LRRC4CQ9HCJ2 640 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 ABCB6Q9NP58 842 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 BRPF3Q9ULD4 1205 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 ANGEL1Q9UNK9 670 aaKnown RBP5.61□□□□□ -1.51
LRCH3-217ENST00000483442 MTMR7Q9Y216 660 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 SETBP1Q9Y6X0 1596 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 SLIT1O75093 1534 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 PRDM15P57071 1507 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-217ENST00000483442 MAP3K1Q13233 1512 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 GPR182O15218 404 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 AOC2O75106 756 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 ASPAP45381 313 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 ZNF157P51786 506 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-217ENST00000483442 CPSF6Q16630 551 aaKnown RBP eCLIP5.6□□□□□ -1.51
LRCH3-217ENST00000483442 GLIS3Q8NEA6 775 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 METTL22Q9BUU2 404 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-217ENST00000483442 EHD4Q9H223 541 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 PAK6Q9NQU5 681 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-217ENST00000483442 RAD18Q9NS91 495 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 AP4E1Q9UPM8 1137 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 U3KQE9 123 aa5.6□□□□□ -1.51
LRCH3-217ENST00000483442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-217ENST00000483442 LIG1P18858 919 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 DEFB132Q7Z7B7 95 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 VSIG10LQ86VR7 867 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 GLYCTKQ8IVS8 523 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 TP53INP2Q8IXH6 220 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 CORO1BQ9BR76 489 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 ZC3H12CQ9C0D7 883 aaKnown RBP5.59□□□□□ -1.51
LRCH3-217ENST00000483442 CCDC86Q9H6F5 360 aaKnown RBP5.59□□□□□ -1.51
LRCH3-217ENST00000483442 RRP7BPQ9NSQ0 103 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 BSDC1Q9NW68 430 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-217ENST00000483442 TRPC5Q9UL62 973 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-217ENST00000483442 TBX22Q9Y458 520 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 UBR1Q8IWV7 1749 aa5.59□□□□□ -1.51
LRCH3-217ENST00000483442 COL16A1Q07092 1604 aaPredicted RBP5.59□□□□□ -1.52
LRCH3-217ENST00000483442 ABCC3O15438 1527 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 CCDC141Q6ZP82 1450 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 ZNF862O60290 1169 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 CPNE3O75131 537 aaKnown RBP5.58□□□□□ -1.52
LRCH3-217ENST00000483442 MAP7Q14244 749 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 ZNF574Q6ZN55 896 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-217ENST00000483442 SPRED2Q7Z698 418 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 CCDC74AQ96AQ1 378 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 DAGLAQ9Y4D2 1042 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 TET3O43151 1660 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 FYCO1Q9BQS8 1478 aa5.58□□□□□ -1.52
LRCH3-217ENST00000483442 EIF1AYO14602 144 aaKnown RBP5.57□□□□□ -1.52
LRCH3-217ENST00000483442 TMPRSS2O15393 492 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 YBX3P16989 372 aaKnown RBP eCLIP5.57□□□□□ -1.52
LRCH3-217ENST00000483442 YY1P25490 414 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 PDE3AQ14432 1141 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 DUSP27Q5VZP5 1158 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 PI16Q6UXB8 463 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 FLCNQ8NFG4 579 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
LRCH3-217ENST00000483442 FBXL18Q96ME1 805 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 PCDHGC5Q9Y5F6 944 aa5.57□□□□□ -1.52
LRCH3-217ENST00000483442 TMEM238LA0A1B0GVL6 79 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 ITGB5P18084 799 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 BNIP3Q12983 259 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 CDK5R2Q13319 367 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 GRM2Q14416 872 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 OGFOD2Q6N063 350 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 PRPF40BQ6NWY9 871 aaKnown RBP5.56□□□□□ -1.52
LRCH3-217ENST00000483442 OGFOD3Q6PK18 319 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 STK35Q8TDR2 534 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
LRCH3-217ENST00000483442 CRIM1Q9NZV1 1036 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 NKTRP30414 1462 aaKnown RBP5.56□□□□□ -1.52
LRCH3-217ENST00000483442 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
LRCH3-217ENST00000483442 TIAM1Q13009 1591 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 EFCAB6Q5THR3 1501 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 NDUFB5O43674 189 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 PTPN12Q05209 780 aaKnown RBP5.55□□□□□ -1.52
LRCH3-217ENST00000483442 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRCH3-217ENST00000483442 FANCD2OSQ96PS1 177 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 DISC1Q9NRI5 854 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 CAMSAP2Q08AD1 1489 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 ARHGAP31Q2M1Z3 1444 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 SETD5Q9C0A6 1442 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 PIK3C2BO00750 1634 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 KANK1Q14678 1352 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 PNPLA6Q8IY17 1366 aa5.55□□□□□ -1.52
LRCH3-217ENST00000483442 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
LRCH3-217ENST00000483442 GADD45BO75293 160 aaPredicted RBP5.54□□□□□ -1.52
LRCH3-217ENST00000483442 LEFTY1O75610 366 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 CD96P40200 585 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 PDZD3Q86UT5 571 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 PLD6Q8N2A8 252 aaKnown RBP5.54□□□□□ -1.52
LRCH3-217ENST00000483442 FAM181AQ8N9Y4 354 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 CSRNP1Q96S65 589 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 CEP162Q5TB80 1403 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 PLEKHG1Q9ULL1 1385 aa5.54□□□□□ -1.52
LRCH3-217ENST00000483442 SHPRHQ149N8 1683 aa5.53□□□□□ -1.52
LRCH3-217ENST00000483442 SYNGAP1Q96PV0 1343 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms