RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
APTX-226ENST00000483148 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 G3V3G9 751 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 APBB1O00213 710 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 CTAGE5O15320 804 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 FKTNO75072 461 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 IVLP07476 585 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 LIG1P18858 919 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 NBPF9Q3BBW0 867 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 VPS53Q5VIR6 699 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 GREM2Q9H772 168 aa11.68□□□□□ -0.54
APTX-226ENST00000483148 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 USP27XA6NNY8 438 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 CLGNO14967 610 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 ERCC6LQ2NKX8 1250 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 ARHGAP29Q52LW3 1261 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 SRLQ86TD4 932 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 UBXN4Q92575 508 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 MYCBPQ99417 103 aaPredicted RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 OSBPL5Q9H0X9 879 aaPredicted RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 GGA1Q9UJY5 639 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 ITGA6P23229 1130 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
APTX-226ENST00000483148 IQCB1Q15051 598 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
APTX-226ENST00000483148 ZNF609O15014 1411 aa11.66□□□□□ -0.54
APTX-226ENST00000483148 SGSM2O43147 1006 aa11.66□□□□□ -0.54
APTX-226ENST00000483148 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
APTX-226ENST00000483148 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
APTX-226ENST00000483148 PNMA6EA0A0J9YXQ4 647 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
APTX-226ENST00000483148 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 ATP8B2P98198 1209 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 IFIT5Q13325 482 aaKnown RBP11.65□□□□□ -0.54
APTX-226ENST00000483148 PRKG1Q13976 671 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 CAMK4Q16566 473 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 STX1AQ16623 288 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 TPRNQ4KMQ1 711 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
APTX-226ENST00000483148 SMARCE1Q969G3 411 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 CDC5LQ99459 802 aaKnown RBP11.65□□□□□ -0.54
APTX-226ENST00000483148 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 RRP15Q9Y3B9 282 aaKnown RBP11.65□□□□□ -0.54
APTX-226ENST00000483148 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
APTX-226ENST00000483148 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 MAGEA9P43362 315 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
APTX-226ENST00000483148 POLA2Q14181 598 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 KCNB2Q92953 911 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 PDRG1Q9NUG6 133 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 ACTN2P35609 894 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 JAKMIP3Q5VZ66 844 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 SPRYD7Q5W111 196 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
APTX-226ENST00000483148 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
APTX-226ENST00000483148 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
APTX-226ENST00000483148 WNT10BO00744 389 aa11.63□□□□□ -0.55
APTX-226ENST00000483148 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
APTX-226ENST00000483148 CAP1Q01518 475 aa11.63□□□□□ -0.55
APTX-226ENST00000483148 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
APTX-226ENST00000483148 TTC31Q49AM3 519 aaPredicted RBP11.63□□□□□ -0.55
APTX-226ENST00000483148 ANKRD18AQ8IVF6 992 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms