RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 INHAP05111 366 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 USP5P45974 858 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 IRF5Q13568 498 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 U2AF1L4Q8WU68 220 aaKnown RBP20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 DPF3Q92784 378 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 SIPA1L1O43166 1804 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
RAB11FIP3-209ENST00000483002 H0YGN5 161 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 APBB1O00213 710 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 MS4A1P11836 297 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 IRX3P78415 501 aaPredicted RBP20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 PCDH10Q9P2E7 1040 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 ZBTB21Q9ULJ3 1066 aa20.19■□□□□ 0.82
RAB11FIP3-209ENST00000483002 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
RAB11FIP3-209ENST00000483002 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
RAB11FIP3-209ENST00000483002 SGPL1O95470 568 aa20.18■□□□□ 0.82
RAB11FIP3-209ENST00000483002 P2RX7Q99572 595 aaKnown RBP20.18■□□□□ 0.82
RAB11FIP3-209ENST00000483002 GINM1Q9NU53 330 aa20.18■□□□□ 0.82
RAB11FIP3-209ENST00000483002 LOC285556D6RIA3 1793 aa20.17■□□□□ 0.82
RAB11FIP3-209ENST00000483002 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
RAB11FIP3-209ENST00000483002 COLQQ9Y215 455 aaPredicted RBP20.17■□□□□ 0.82
RAB11FIP3-209ENST00000483002 FOCADQ5VW36 1801 aa20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 PEX10O60683 326 aa20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 GH2P01242 217 aa20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 TFRCP02786 760 aaKnown RBP20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 HOXA7P31268 230 aaPredicted RBP20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 DEFB118Q96PH6 123 aa20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
RAB11FIP3-209ENST00000483002 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 UBE2Q1Q7Z7E8 422 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 RPAP2Q8IXW5 612 aaPredicted RBP20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 HTATIP2Q9BUP3 242 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 MORF4L1Q9UBU8 362 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 GJD2Q9UKL4 321 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 MYH1P12882 1939 aa20.15■□□□□ 0.82
RAB11FIP3-209ENST00000483002 HERVK_113P62684 666 aa20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TTF1Q15361 905 aaPredicted RBP20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TTC6Q86TZ1 520 aa20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 KIF1BPQ96EK5 621 aa20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 EMILIN3Q9NT22 766 aa20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
RAB11FIP3-209ENST00000483002 MAGEB6P1A0A0J9YX57 407 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 HMMRO75330 724 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 SLC9C2Q5TAH2 1124 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TATDN1Q6P1N9 297 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TMED8Q6PL24 325 aaPredicted RBP20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 SIRT2Q8IXJ6 389 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 GPRC5AQ8NFJ5 357 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TXNRD2Q9NNW7 524 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TRIOBPQ9H2D6 2365 aa20.13■□□□□ 0.81
RAB11FIP3-209ENST00000483002 PLCD1P51178 756 aa20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RAB3GAP1Q15042 981 aa20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ZYXQ15942 572 aaKnown RBP20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CERKLQ49MI3 558 aaPredicted RBP20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 DNAJC2Q99543 621 aaKnown RBP20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 FEZ1Q99689 392 aa20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RIOK1Q9BRS2 568 aaKnown RBP20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 EHD4Q9H223 541 aa20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 PAK6Q9NQU5 681 aaPredicted RBP20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RBPJLQ9UBG7 517 aa20.12■□□□□ 0.81
RAB11FIP3-209ENST00000483002 GOLIM4O00461 696 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 HMGCRP04035 888 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 PDE6AP16499 860 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CYP2B6P20813 491 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ABCB5Q2M3G0 1257 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 Q3C1V9 767 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CCAR1Q8IX12 1150 aaKnown RBP20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 PAGR1Q9BTK6 254 aa20.11■□□□□ 0.81
RAB11FIP3-209ENST00000483002 TRIM32Q13049 653 aa20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CHRDL2Q6WN34 429 aa20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CRNKL1Q9BZJ0 848 aaKnown RBP20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CABP5Q9NP86 173 aa20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 NR2E3Q9Y5X4 410 aa20.1■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ZNF532Q9HCE3 1301 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CAPN2P17655 700 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 FXR1P51114 621 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 EDC3Q96F86 508 aaKnown RBP20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 CRISPLD2Q9H0B8 497 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 HMX1Q9NP08 348 aaPredicted RBP20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 MCM9Q9NXL9 1143 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RCAN3Q9UKA8 241 aa20.09■□□□□ 0.81
RAB11FIP3-209ENST00000483002 RPTORQ8N122 1335 aa20.08■□□□□ 0.81
RAB11FIP3-209ENST00000483002 MAPK4P31152 587 aa20.08■□□□□ 0.81
RAB11FIP3-209ENST00000483002 SHMT1P34896 483 aa20.08■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ERVK-9P63128 1117 aa20.08■□□□□ 0.81
RAB11FIP3-209ENST00000483002 ERVK-24P63145 666 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms