RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ANKRD23Q86SG2 305 aa22.04■■□□□ 1.12
SMIM4-204ENST00000482728 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
SMIM4-204ENST00000482728 ZNF296Q8WUU4 475 aaPredicted RBP22.04■■□□□ 1.12
SMIM4-204ENST00000482728 CABP5Q9NP86 173 aa22.04■■□□□ 1.12
SMIM4-204ENST00000482728 DOCK1Q14185 1865 aa22.04■■□□□ 1.12
SMIM4-204ENST00000482728 A0A0G2JLL6 359 aaPredicted RBP22.03■■□□□ 1.12
SMIM4-204ENST00000482728 FKTNO75072 461 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 C12orf60Q5U649 245 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 PRRT2Q7Z6L0 340 aaPredicted RBP22.03■■□□□ 1.12
SMIM4-204ENST00000482728 SEC62Q99442 399 aaKnown RBP22.03■■□□□ 1.12
SMIM4-204ENST00000482728 TAOK2Q9UL54 1235 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 ZBTB21Q9ULJ3 1066 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 SIPA1L1O43166 1804 aa22.03■■□□□ 1.12
SMIM4-204ENST00000482728 GSG1L2A8MUP6 293 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 PDHXO00330 501 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 GH2P01242 217 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 JAG1P78504 1218 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 GABPAQ06546 454 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 ABCB5Q2M3G0 1257 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 NACAP1Q9BZK3 213 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 SWAP70Q9UH65 585 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 NAV1Q8NEY1 1877 aa22.02■■□□□ 1.12
SMIM4-204ENST00000482728 LAMB1P07942 1786 aa22.02■■□□□ 1.11
SMIM4-204ENST00000482728 CYP2D7A0A087X1C5 515 aa22.01■■□□□ 1.11
SMIM4-204ENST00000482728 PATL2C9JE40 543 aaKnown RBP22.01■■□□□ 1.11
SMIM4-204ENST00000482728 SHMT1P34896 483 aa22.01■■□□□ 1.11
SMIM4-204ENST00000482728 CTR9Q6PD62 1173 aa22.01■■□□□ 1.11
SMIM4-204ENST00000482728 DYNLL2Q96FJ2 89 aa22.01■■□□□ 1.11
SMIM4-204ENST00000482728 WDR18Q9BV38 432 aa22.01■■□□□ 1.11
SMIM4-204ENST00000482728 ARPP21Q9UBL0 812 aaPredicted RBP22.01■■□□□ 1.11
SMIM4-204ENST00000482728 BAZ2AQ9UIF9 1905 aaKnown RBP22■■□□□ 1.11
SMIM4-204ENST00000482728 NEFLP07196 543 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 TDO2P48775 406 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 EVX2Q03828 476 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 MOGSQ13724 837 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 RAB3GAP1Q15042 981 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 HELLSQ9NRZ9 838 aa22■■□□□ 1.11
SMIM4-204ENST00000482728 MINDY4BA8MYZ0 360 aa21.99■■□□□ 1.11
SMIM4-204ENST00000482728 MPHOSPH10O00566 681 aaKnown RBP21.99■■□□□ 1.11
SMIM4-204ENST00000482728 DGKZQ13574 1117 aa21.99■■□□□ 1.11
SMIM4-204ENST00000482728 SHROOM1Q2M3G4 852 aaPredicted RBP21.99■■□□□ 1.11
SMIM4-204ENST00000482728 SBK1Q52WX2 424 aa21.99■■□□□ 1.11
SMIM4-204ENST00000482728 GPAT2Q6NUI2 795 aa21.99■■□□□ 1.11
SMIM4-204ENST00000482728 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
SMIM4-204ENST00000482728 PDE4AP27815 886 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 CDK8P49336 464 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 HMGCS2P54868 508 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 BACE1P56817 501 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 SP3Q02447 781 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 SLC44A5Q8NCS7 719 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 TMOD4Q9NZQ9 345 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 ATAD5Q96QE3 1844 aa21.98■■□□□ 1.11
SMIM4-204ENST00000482728 C19orf81C9J6K1 198 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 USP17L10C9JJH3 530 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 TLR2O60603 784 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 MTMR2Q13614 643 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 MCMDC2Q4G0Z9 681 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 CTU1Q7Z7A3 348 aaKnown RBP21.97■■□□□ 1.11
SMIM4-204ENST00000482728 PROCA1Q8NCQ7 364 aaPredicted RBP21.97■■□□□ 1.11
SMIM4-204ENST00000482728 CCDC17Q96LX7 622 aa21.97■■□□□ 1.11
SMIM4-204ENST00000482728 PARK7Q99497 189 aaKnown RBP21.97■■□□□ 1.11
SMIM4-204ENST00000482728 SDSP20132 328 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 PABPC4Q13310 644 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMIM4-204ENST00000482728 CCDC129Q6ZRS4 1044 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 C16orf86Q6ZW13 317 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 ERO1AQ96HE7 468 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 FAM227BQ96M60 508 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 FEZ1Q99689 392 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 NAPBQ9H115 298 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 AGTPBP1Q9UPW5 1226 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 SLC45A1Q9Y2W3 748 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 PHIPQ8WWQ0 1821 aa21.96■■□□□ 1.11
SMIM4-204ENST00000482728 DDX60LQ5H9U9 1706 aaKnown RBP21.95■■□□□ 1.1
SMIM4-204ENST00000482728 SMIM22K7EJ46 135 aa21.95■■□□□ 1.1
SMIM4-204ENST00000482728 HIP1O00291 1037 aa21.95■■□□□ 1.1
SMIM4-204ENST00000482728 NMIQ13287 307 aaPredicted RBP21.95■■□□□ 1.1
SMIM4-204ENST00000482728 SH3D19Q5HYK7 790 aa21.95■■□□□ 1.1
SMIM4-204ENST00000482728 MKNK2Q9HBH9 465 aa21.95■■□□□ 1.1
SMIM4-204ENST00000482728 EPB41L4AQ9HCS5 686 aaPredicted RBP21.95■■□□□ 1.1
SMIM4-204ENST00000482728 DIAPH3Q9NSV4 1193 aa21.95■■□□□ 1.1
SMIM4-204ENST00000482728 A0A0D9SFI3 127 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 SLC3A2P08195 630 aaKnown RBP21.94■■□□□ 1.1
SMIM4-204ENST00000482728 CYP2C8P10632 490 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 SEPT2Q15019 361 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 ARHGEF6Q15052 776 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 TREML2Q5T2D2 321 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 USP17L2Q6R6M4 530 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 TMEM179Q6ZVK1 233 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
SMIM4-204ENST00000482728 STK11IPQ8N1F8 1099 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 MCOLN1Q9GZU1 580 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 ZNF287Q9HBT7 754 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 CPA4Q9UI42 421 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 PNMA3Q9UL41 463 aa21.94■■□□□ 1.1
SMIM4-204ENST00000482728 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
SMIM4-204ENST00000482728 KIF22Q14807 665 aa21.93■■□□□ 1.1
SMIM4-204ENST00000482728 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
SMIM4-204ENST00000482728 SMCR8Q8TEV9 937 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms