RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 BACE1P56817 501 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 COA7Q96BR5 231 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 GABRQQ9UN88 632 aa16.34■□□□□ 0.21
CTDSP1-208ENST00000482272 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 FLT3LGP49771 235 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 EVX2Q03828 476 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 MTFR1Q15390 333 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 FAM110CQ1W6H9 321 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
CTDSP1-208ENST00000482272 ADCY3O60266 1144 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 GDF11O95390 407 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 CHGBP05060 677 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 MTMR2Q13614 643 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 SLC9C2Q5TAH2 1124 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 RNF208Q9H0X6 261 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 SERPINB13Q9UIV8 391 aa16.32■□□□□ 0.2
CTDSP1-208ENST00000482272 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 CCL5P13501 91 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 IRF5Q13568 498 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 EHD4Q9H223 541 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
CTDSP1-208ENST00000482272 POLR3DP05423 398 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-208ENST00000482272 GJB1P08034 283 aa16.3■□□□□ 0.2
CTDSP1-208ENST00000482272 TATDN1Q6P1N9 297 aa16.3■□□□□ 0.2
CTDSP1-208ENST00000482272 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-208ENST00000482272 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
CTDSP1-208ENST00000482272 MYH7P12883 1935 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 GOLIM4O00461 696 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 GJA8P48165 433 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 CERKLQ49MI3 558 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
CTDSP1-208ENST00000482272 ZNF532Q9HCE3 1301 aa16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 PEX10O60683 326 aa16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 GH2P01242 217 aa16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 PDE6AP16499 860 aa16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 CAPN2P17655 700 aa16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-208ENST00000482272 ELNP15502 786 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 ATP5JP18859 108 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 ABCB5Q2M3G0 1257 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 GPRC5AQ8NFJ5 357 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 BOLA2Q9H3K6 86 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
CTDSP1-208ENST00000482272 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.19
CTDSP1-208ENST00000482272 BAZ2AQ9UIF9 1905 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 SMIM22K7EJ46 135 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 SGPL1O95470 568 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 INHAP05111 366 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 PLCD1P51178 756 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 USP14P54578 494 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 HERVK_113P62684 666 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 FEZ1Q99689 392 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
CTDSP1-208ENST00000482272 LCORLQ8N3X6 602 aa16.25■□□□□ 0.19
CTDSP1-208ENST00000482272 DPF3Q92784 378 aa16.25■□□□□ 0.19
CTDSP1-208ENST00000482272 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
CTDSP1-208ENST00000482272 TFRCP02786 760 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms