RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 RNF112Q9ULX5 631 aa5.51□□□□□ -1.53
VPS41-212ENST00000482217 PRR36Q9H6K5 1346 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 CCDC194A0A1B0GVG4 234 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 TLDC2A0PJX2 215 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 TMPRSS2O15393 492 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 ADH5P11766 374 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 DNAJA1P31689 397 aaKnown RBP5.5□□□□□ -1.53
VPS41-212ENST00000482217 RING1Q06587 406 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 SOX4Q06945 474 aaPredicted RBP5.5□□□□□ -1.53
VPS41-212ENST00000482217 PTPROQ16827 1216 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 AKAP4Q5JQC9 854 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 XP32Q5T750 250 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 CCDC181Q5TID7 509 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 CYFIP1Q7L576 1253 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 ARMC5Q96C12 935 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 TANGO6Q9C0B7 1094 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 ATXN3LQ9H3M9 355 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 GSX1Q9H4S2 264 aaPredicted RBP5.5□□□□□ -1.53
VPS41-212ENST00000482217 PIF1Q9H611 641 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 METTL14Q9HCE5 456 aaKnown RBP5.5□□□□□ -1.53
VPS41-212ENST00000482217 GABBR1Q9UBS5 961 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 PPP1R9AQ9ULJ8 1098 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 FAN1Q9Y2M0 1017 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 RPS6KL1Q9Y6S9 549 aa5.5□□□□□ -1.53
VPS41-212ENST00000482217 SCO2A0A1W2PP80 73 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 DCDC2CA8MYV0 355 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 FANCGO15287 622 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 ATE1O95260 518 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 FGRP09769 529 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 IMPDH2P12268 514 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 PREPP48147 710 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 NASPP49321 788 aaPredicted RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 CDK8P49336 464 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 IGBP1P78318 339 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 PDE4BQ07343 736 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 OS9Q13438 667 aaPredicted RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 LRP8Q14114 963 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 SDE2Q6IQ49 451 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 CLEC10AQ8IUN9 316 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 FAM20CQ8IXL6 584 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 C12orf50Q8NA57 414 aaPredicted RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 RNF214Q8ND24 703 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 FAM83CQ9BQN1 747 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS41-212ENST00000482217 EHMT1Q9H9B1 1298 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 CHPF2Q9P2E5 772 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 PNMA2Q9UL42 364 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
VPS41-212ENST00000482217 TBX22Q9Y458 520 aa5.49□□□□□ -1.53
VPS41-212ENST00000482217 hCG_2014768A0A024R1R8 64 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 CREB3O43889 395 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 BMP3P12645 472 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 ATP2B1P20020 1258 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 MCCP23508 829 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 PAX3P23760 479 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 MCM4P33991 863 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 ARTNQ5T4W7 220 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 C12orf40Q86WS4 652 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 MCF2L2Q86YR7 1114 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 C2CD4AQ8NCU7 369 aaPredicted RBP5.48□□□□□ -1.53
VPS41-212ENST00000482217 FANCD2OSQ96PS1 177 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 DISC1Q9NRI5 854 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 ADAM30Q9UKF2 790 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 AP4E1Q9UPM8 1137 aa5.48□□□□□ -1.53
VPS41-212ENST00000482217 POLR3KQ9Y2Y1 108 aaPredicted RBP5.48□□□□□ -1.53
VPS41-212ENST00000482217 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.47□□□□□ -1.53
VPS41-212ENST00000482217 SSBP05455 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS41-212ENST00000482217 NFIAQ12857 509 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 MLECQ14165 292 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 TCEAL1Q15170 157 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 PPM1JQ5JR12 505 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 ZBTB37Q5TC79 503 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 RNF43Q68DV7 783 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 BEND4Q6ZU67 534 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 DYMQ7RTS9 669 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 KCT2Q8NC54 265 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 FERD3LQ96RJ6 166 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 DBNDD2Q9BQY9 259 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 YIPF2Q9BWQ6 316 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 SRRTQ9BXP5 876 aaKnown RBP5.47□□□□□ -1.53
VPS41-212ENST00000482217 WNT10AQ9GZT5 417 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 C7orf69Q9H7B7 122 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 ZFP64Q9NPA5 681 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 PICK1Q9NRD5 415 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 KCNG1Q9UIX4 513 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 ZNRF3Q9ULT6 936 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 PCDHB14Q9Y5E9 798 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 CSADQ9Y600 493 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 ACTL7BQ9Y614 415 aa5.47□□□□□ -1.53
VPS41-212ENST00000482217 PRAMEF27A3QJZ7 478 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 U2SURPO15042 1029 aaKnown RBP5.46□□□□□ -1.54
VPS41-212ENST00000482217 HTR3BO95264 441 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms