RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 HMGCRP04035 888 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 LDHCP07864 332 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 RHBDL3P58872 404 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 TEX11Q8IYF3 940 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
DDX39B-220ENST00000482195 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
DDX39B-220ENST00000482195 PAWRQ96IZ0 340 aaKnown RBP12.71□□□□□ -0.37
DDX39B-220ENST00000482195 LAMA3Q16787 3333 aa12.71□□□□□ -0.38
DDX39B-220ENST00000482195 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-220ENST00000482195 GNAI3P08754 354 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 GCLCP48506 637 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-220ENST00000482195 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-220ENST00000482195 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-220ENST00000482195 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-220ENST00000482195 HMG20BQ9P0W2 317 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-220ENST00000482195 MYH1P12882 1939 aa12.7□□□□□ -0.38
DDX39B-220ENST00000482195 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 TBC1D12O60347 775 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-220ENST00000482195 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
DDX39B-220ENST00000482195 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-220ENST00000482195 PRO3102Q9H379 93 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 LRP2BPQ9P2M1 347 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
DDX39B-220ENST00000482195 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-220ENST00000482195 CAP2P40123 477 aa12.68□□□□□ -0.38
DDX39B-220ENST00000482195 TRIM32Q13049 653 aa12.68□□□□□ -0.38
DDX39B-220ENST00000482195 MTMR2Q13614 643 aa12.68□□□□□ -0.38
DDX39B-220ENST00000482195 SH3RF3Q8TEJ3 882 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-220ENST00000482195 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
DDX39B-220ENST00000482195 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
DDX39B-220ENST00000482195 HMX1Q9NP08 348 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-220ENST00000482195 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.387e-11■■■■□ 20.8
DDX39B-220ENST00000482195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-220ENST00000482195 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 CAPN2P17655 700 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 CYP2B6P20813 491 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 MCAMP43121 646 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 OS9Q13438 667 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
DDX39B-220ENST00000482195 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 HERC5Q9UII4 1024 aaKnown RBP12.67□□□□□ -0.38
DDX39B-220ENST00000482195 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 GDF11O95390 407 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 SYN1P17600 705 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
DDX39B-220ENST00000482195 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
DDX39B-220ENST00000482195 TMEM132AQ24JP5 1023 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-220ENST00000482195 ANKLE1Q8NAG6 615 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 TRIB2Q92519 343 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 C11orf49Q9H6J7 331 aa12.66□□□□□ -0.38
DDX39B-220ENST00000482195 PEX10O60683 326 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 BAG3O95817 575 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 GNAI2P04899 355 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 PLCG2P16885 1265 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 MTX1Q13505 466 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
DDX39B-220ENST00000482195 TGFBRAP1Q8WUH2 860 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-220ENST00000482195 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 PAGR1Q9BTK6 254 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.38
DDX39B-220ENST00000482195 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
DDX39B-220ENST00000482195 FLT1P17948 1338 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 ASNSP08243 561 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-220ENST00000482195 BACE1P56817 501 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 HERVK_113P62684 666 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 SHROOM1Q2M3G4 852 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-220ENST00000482195 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 SOCS4Q8WXH5 440 aa12.64□□□□□ -0.39
DDX39B-220ENST00000482195 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms