RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-205ENST00000482013 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 USP40Q9NVE5 1235 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 RASA1P20936 1047 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 CDK8P49336 464 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 TFAP4Q01664 338 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 TROAPQ12815 778 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 TRIM29Q14134 588 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
GGPS1-205ENST00000482013 APOBEC3HQ6NTF7 200 aaKnown RBP13.6□□□□□ -0.23
GGPS1-205ENST00000482013 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 CHAMP1Q96JM3 812 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 RNF26Q9BY78 433 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-205ENST00000482013 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-205ENST00000482013 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
GGPS1-205ENST00000482013 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 FIBPO43427 364 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 DTNBO60941 627 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 DEXIO95424 95 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 TSPY3P0CV98 308 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 TSPY8P0CW00 308 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 KIF5BP33176 963 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 MMP14P50281 582 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 PLCD1P51178 756 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 ZNF445P59923 1031 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 FOXD4L6Q3SYB3 417 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 FAM47AQ5JRC9 791 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 FOXD4L3Q6VB84 417 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 DYNLL2Q96FJ2 89 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 MYL10Q9BUA6 226 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 DHX36Q9H2U1 1008 aaKnown RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 SAP30BPQ9UHR5 308 aaKnown RBP13.59□□□□□ -0.23
GGPS1-205ENST00000482013 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
GGPS1-205ENST00000482013 MYH8P13535 1937 aa13.58□□□□□ -0.23
GGPS1-205ENST00000482013 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
GGPS1-205ENST00000482013 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 GOLGA6L3A6NEY3 463 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 PRPF3O43395 683 aaKnown RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 VIL1P09327 827 aaKnown RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 XBP1P17861 261 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 RXRAP19793 462 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 NOVP48745 357 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 GNAQP50148 359 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 SCNN1DP51172 638 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 GABPAQ06546 454 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 KRT40Q6A162 431 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 RCSD1Q6JBY9 416 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 SLC26A6Q9BXS9 759 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-205ENST00000482013 EHD4Q9H223 541 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 GDPD2Q9HCC8 539 aa13.58□□□□□ -0.24
GGPS1-205ENST00000482013 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 HLA-DOAP06340 250 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-205ENST00000482013 EVX2Q03828 476 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 CCDC144CPQ8IYA2 1237 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 FAM177A1Q8N128 213 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-205ENST00000482013 LEO1Q8WVC0 666 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-205ENST00000482013 PHKBQ93100 1093 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 MXD3Q9BW11 206 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-205ENST00000482013 KCNQ5Q9NR82 932 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 IL17RBQ9NRM6 502 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
GGPS1-205ENST00000482013 COL2A1P02458 1487 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 YEATS4O95619 227 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 U2AF2P26368 475 aaKnown RBP eCLIP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 FUT2Q10981 343 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 ZSCAN23Q3MJ62 389 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 RSBN1LQ6PCB5 846 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 KIAA0825Q8IV33 1275 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 CCDC17Q96LX7 622 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 LZTS2Q9BRK4 669 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 DDX4Q9NQI0 724 aaKnown RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms