RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PAGR1Q9BTK6 254 aa18.54■□□□□ 0.56
HDAC6-224ENST00000481929 RBPJLQ9UBG7 517 aa18.54■□□□□ 0.56
HDAC6-224ENST00000481929 PRUNE2Q8WUY3 3088 aa18.54■□□□□ 0.56
HDAC6-224ENST00000481929 MSCO60682 206 aa18.53■□□□□ 0.56
HDAC6-224ENST00000481929 ASNSP08243 561 aa18.53■□□□□ 0.56
HDAC6-224ENST00000481929 IL15P40933 162 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-224ENST00000481929 RTP1P59025 263 aa18.53■□□□□ 0.56
HDAC6-224ENST00000481929 SHHQ15465 462 aa18.53■□□□□ 0.56
HDAC6-224ENST00000481929 DNAH12Q6ZR08 3092 aa18.53■□□□□ 0.56
HDAC6-224ENST00000481929 MRPL50Q8N5N7 158 aaKnown RBP18.53■□□□□ 0.56
HDAC6-224ENST00000481929 LTBP2Q14767 1821 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 C19orf81C9J6K1 198 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 DNM1LO00429 736 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 LDHCP07864 332 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 COL9A1P20849 921 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 GSTO1P78417 241 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 SMAD3P84022 425 aaKnown RBP18.52■□□□□ 0.56
HDAC6-224ENST00000481929 MAP2K5Q13163 448 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 Q3C1V9 767 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 TTYH1Q9H313 450 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-224ENST00000481929 DDX20Q9UHI6 824 aaKnown RBP18.52■□□□□ 0.56
HDAC6-224ENST00000481929 ATP11BQ9Y2G3 1177 aa18.52■□□□□ 0.56
HDAC6-224ENST00000481929 USP17L10C9JJH3 530 aa18.51■□□□□ 0.55
HDAC6-224ENST00000481929 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
HDAC6-224ENST00000481929 CNGA1P29973 690 aa18.51■□□□□ 0.55
HDAC6-224ENST00000481929 C9orf50Q5SZB4 431 aa18.51■□□□□ 0.55
HDAC6-224ENST00000481929 ZNF384Q8TF68 577 aa18.51■□□□□ 0.55
HDAC6-224ENST00000481929 LPAR1Q92633 364 aa18.51■□□□□ 0.55
HDAC6-224ENST00000481929 EDC3Q96F86 508 aaKnown RBP18.51■□□□□ 0.55
HDAC6-224ENST00000481929 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
HDAC6-224ENST00000481929 PRDM5Q9NQX1 630 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-224ENST00000481929 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
HDAC6-224ENST00000481929 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
HDAC6-224ENST00000481929 CCNA1P78396 465 aa18.49■□□□□ 0.55
HDAC6-224ENST00000481929 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
HDAC6-224ENST00000481929 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
HDAC6-224ENST00000481929 FLRT1Q9NZU1 646 aa18.49■□□□□ 0.55
HDAC6-224ENST00000481929 TMEM265A0A087WTH1 108 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 TIMM10P62072 90 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
HDAC6-224ENST00000481929 TJAP1Q5JTD0 557 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 BADQ92934 168 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
HDAC6-224ENST00000481929 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
HDAC6-224ENST00000481929 PA2G4Q9UQ80 394 aaKnown RBP18.48■□□□□ 0.55
HDAC6-224ENST00000481929 SLC15A5A6NIM6 579 aa18.47■□□□□ 0.55
HDAC6-224ENST00000481929 TNFRSF10AO00220 468 aa18.47■□□□□ 0.55
HDAC6-224ENST00000481929 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
HDAC6-224ENST00000481929 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
HDAC6-224ENST00000481929 RABGAP1Q9Y3P9 1069 aa18.47■□□□□ 0.55
HDAC6-224ENST00000481929 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
HDAC6-224ENST00000481929 A0A1B0GUL7 405 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 KBTBD13C9JR72 458 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 GDF11O95390 407 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 JAG1P78504 1218 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-224ENST00000481929 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 POTEEQ6S8J3 1075 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 SLC39A5Q6ZMH5 540 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 CRACR2BQ8N4Y2 399 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-224ENST00000481929 ARRDC4Q8NCT1 418 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 ZBTB21Q9ULJ3 1066 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
HDAC6-224ENST00000481929 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 HOXC6P09630 235 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 PTPREP23469 700 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 CYP2C19P33261 490 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-224ENST00000481929 DNAJC18Q9H819 358 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 COPRSQ9NQ92 184 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 EMILIN3Q9NT22 766 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 HMG20BQ9P0W2 317 aa18.45■□□□□ 0.54
HDAC6-224ENST00000481929 CDH23Q9H251 3354 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 CNMDO75829 334 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-224ENST00000481929 TRIM60Q495X7 471 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 SPATA5Q8NB90 893 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 RLFQ13129 1914 aa18.44■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L15C9J2P7 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L13C9JLJ4 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L11C9JVI0 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L18D6R9N7 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L22D6RA61 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L17D6RBQ6 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L19D6RCP7 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L20D6RJB6 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 CYBAP13498 195 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 USP17L24Q0WX57 530 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 GRB14Q14449 540 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 FOXP4Q8IVH2 680 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-224ENST00000481929 TRPV1Q8NER1 839 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms