RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 A0A1B0GTH6 734 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 HSPA2P54652 639 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 SLC35F6Q8N357 371 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-211ENST00000481804 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
CCDC78-211ENST00000481804 IFNAR1P17181 557 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 GOLGA6L1Q8N7Z2 621 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 CTAGE1Q96RT6 745 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 PES1O00541 588 aaKnown RBP16.29■□□□□ 0.2
CCDC78-211ENST00000481804 COBLO75128 1261 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 MBD4O95243 580 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 ITGA6P23229 1130 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 SGMS1Q86VZ5 419 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 ACRBPQ8NEB7 543 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 PNKPQ96T60 521 aa16.29■□□□□ 0.2
CCDC78-211ENST00000481804 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-211ENST00000481804 N4BP3O15049 544 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ACTN2P35609 894 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 GBP3Q9H0R5 595 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 RGPD5Q99666 1765 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 MYO1CO00159 1063 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 LIFRP42702 1097 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 STAMQ92783 540 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 FOXP1Q9H334 677 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ANKRD18BA2A2Z9 1011 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 TRIM66O15016 1216 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ACTN4O43707 911 aaKnown RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 MFAP3LO75121 409 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 DEXIO95424 95 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 PHKA1P46020 1223 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 SARSP49591 514 aaKnown RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 HELBQ8NG08 1087 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-211ENST00000481804 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 MED15Q96RN5 788 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ACBD3Q9H3P7 528 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 CNNM2Q9H8M5 875 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
CCDC78-211ENST00000481804 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 ELOA2Q8IYF1 753 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-211ENST00000481804 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 MAGEB6Q8N7X4 407 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 EPSTI1Q96J88 318 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 KRT23Q9C075 422 aa16.27■□□□□ 0.2
CCDC78-211ENST00000481804 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.2
CCDC78-211ENST00000481804 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.19
CCDC78-211ENST00000481804 XBP1P17861 261 aa16.27■□□□□ 0.19
CCDC78-211ENST00000481804 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.19
CCDC78-211ENST00000481804 UBAC1Q9BSL1 405 aa16.27■□□□□ 0.19
CCDC78-211ENST00000481804 GREM2Q9H772 168 aa16.27■□□□□ 0.19
CCDC78-211ENST00000481804 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.19
CCDC78-211ENST00000481804 SPEF2Q9C093 1822 aa16.27■□□□□ 0.19
CCDC78-211ENST00000481804 MAP2K7O14733 419 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 AKNAD1Q5T1N1 836 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 TOM1L2Q6ZVM7 507 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 VPS16Q9H269 839 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 SLC20A2Q08357 652 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
CCDC78-211ENST00000481804 LCMT1Q9UIC8 334 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 RRP15Q9Y3B9 282 aaKnown RBP16.26■□□□□ 0.19
CCDC78-211ENST00000481804 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-211ENST00000481804 IVLP07476 585 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 VSNL1P62760 191 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
CCDC78-211ENST00000481804 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
CCDC78-211ENST00000481804 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
CCDC78-211ENST00000481804 FXR1P51114 621 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC78-211ENST00000481804 TUBB2AQ13885 445 aa16.25■□□□□ 0.19
CCDC78-211ENST00000481804 SKIDA1Q1XH10 827 aa16.25■□□□□ 0.19
CCDC78-211ENST00000481804 HNRNPLLQ8WVV9 542 aaKnown RBP16.25■□□□□ 0.19
CCDC78-211ENST00000481804 TUBB2BQ9BVA1 445 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms