RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 GLI1P08151 1106 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 BMP7P18075 431 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 LINC00310P59036 64 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 SULF2Q8IWU5 870 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 DUSP23Q9BVJ7 150 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
COPA-204ENST00000481522 CCDC9Q9Y3X0 531 aaKnown RBP6.34□□□□□ -1.39
COPA-204ENST00000481522 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
COPA-204ENST00000481522 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 BAZ1AQ9NRL2 1556 aaPredicted RBP6.33□□□□□ -1.4
COPA-204ENST00000481522 FBXO24O75426 580 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 LEFTY1O75610 366 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
COPA-204ENST00000481522 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 TMEM253P0C7T8 217 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 ITGAEP38570 1179 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 PSMD2Q13200 908 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
COPA-204ENST00000481522 BCL11AQ9H165 835 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 MRS2Q9HD23 443 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 SMG5Q9UPR3 1016 aaKnown RBP6.33□□□□□ -1.4
COPA-204ENST00000481522 CTNND2Q9UQB3 1225 aa6.33□□□□□ -1.4
COPA-204ENST00000481522 SRCAPQ6ZRS2 3230 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 LIG1P18858 919 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 NME2P22392 152 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 AFMP43652 599 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 ID3Q02535 119 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 MPZL3Q6UWV2 235 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 FBXO33Q7Z6M2 555 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 ASB11Q8WXH4 323 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 EMILIN2Q9BXX0 1053 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 AK5Q9Y6K8 562 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 UNC13AQ9UPW8 1703 aa6.32□□□□□ -1.4
COPA-204ENST00000481522 TCAF2A6NFQ2 919 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 RNGTTO60942 597 aaKnown RBP6.31□□□□□ -1.4
COPA-204ENST00000481522 ITIH2P19823 946 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 ZP2Q05996 745 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 IKZF1Q13422 519 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 KCNB2Q92953 911 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 ACSBG1Q96GR2 724 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 NECAB3Q96P71 396 aaPredicted RBP6.31□□□□□ -1.4
COPA-204ENST00000481522 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 PODXL2Q9NZ53 605 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
COPA-204ENST00000481522 ENC1O14682 589 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 GLDCP23378 1020 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 ARNTP27540 789 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 DAB2P98082 770 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 TTLL4Q14679 1199 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 MAP1SQ66K74 1059 aaPredicted RBP6.3□□□□□ -1.4
COPA-204ENST00000481522 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
COPA-204ENST00000481522 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
COPA-204ENST00000481522 CCDC86Q9H6F5 360 aaKnown RBP6.3□□□□□ -1.4
COPA-204ENST00000481522 CELA3AP09093 270 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
COPA-204ENST00000481522 TMC4Q7Z404 712 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 PDZD3Q86UT5 571 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 FAM161BQ96MY7 647 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 RNF19AQ9NV58 838 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 VTI1BQ9UEU0 232 aa6.29□□□□□ -1.4
COPA-204ENST00000481522 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
COPA-204ENST00000481522 SORBS3O60504 671 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 CELA3BP08861 270 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
COPA-204ENST00000481522 LMNB1P20700 586 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 LRRC14Q15048 493 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 ZNF326Q5BKZ1 582 aaKnown RBP6.28□□□□□ -1.4
COPA-204ENST00000481522 PCNX4Q63HM2 1172 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 LLGL2Q6P1M3 1020 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 TOP6BLQ8N6T0 577 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
COPA-204ENST00000481522 NSUN3Q9H649 340 aaKnown RBP6.28□□□□□ -1.4
COPA-204ENST00000481522 BICRAQ9NZM4 1560 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 ZNF862O60290 1169 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 PAGE1O75459 146 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 KIF4BQ2VIQ3 1234 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 STK35Q8TDR2 534 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 KIRREL1Q96J84 757 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 HEXIM2Q96MH2 286 aaKnown RBP6.27□□□□□ -1.41
COPA-204ENST00000481522 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
COPA-204ENST00000481522 TRIM37O94972 964 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 ZNF252P-AS1Q0IIN9 211 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 CYFIP1Q7L576 1253 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 SPACA3Q8IXA5 215 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 GPBAR1Q8TDU6 330 aa6.26□□□□□ -1.41
COPA-204ENST00000481522 SSU72Q9NP77 194 aaKnown RBP6.26□□□□□ -1.41
COPA-204ENST00000481522 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms