RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 POLR3DP05423 398 aaPredicted RBP21.31■■□□□ 1
MRPL28-209ENST00000481453 SSRP1Q08945 709 aaKnown RBP21.31■■□□□ 1
MRPL28-209ENST00000481453 MYSM1Q5VVJ2 828 aa21.31■■□□□ 1
MRPL28-209ENST00000481453 MCM9Q9NXL9 1143 aa21.31■■□□□ 1
MRPL28-209ENST00000481453 PYCARDQ9ULZ3 195 aa21.31■■□□□ 1
MRPL28-209ENST00000481453 DDX60LQ5H9U9 1706 aaKnown RBP21.3■■□□□ 1
MRPL28-209ENST00000481453 FAM205AQ6ZU69 1335 aa21.3■■□□□ 1
MRPL28-209ENST00000481453 GUCY1A2P33402 732 aa21.3■■□□□ 1
MRPL28-209ENST00000481453 PDE6BP35913 854 aa21.3■■□□□ 1
MRPL28-209ENST00000481453 C12orf60Q5U649 245 aa21.3■■□□□ 1
MRPL28-209ENST00000481453 POTEAQ6S8J7 498 aa21.3■■□□□ 1
MRPL28-209ENST00000481453 LDHCP07864 332 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 ZNF165P49910 485 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 MFSD14BQ5SR56 506 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 CRACR2BQ8N4Y2 399 aaPredicted RBP21.29■■□□□ 1
MRPL28-209ENST00000481453 NUP133Q8WUM0 1156 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 CLIC4Q9Y696 253 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 ROBO3Q96MS0 1386 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 BAG3O95817 575 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 USP5P45974 858 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 IQCA1Q86XH1 822 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 CMTR1Q8N1G2 835 aaKnown RBP21.29■■□□□ 1
MRPL28-209ENST00000481453 DNAJC25Q9H1X3 360 aa21.29■■□□□ 1
MRPL28-209ENST00000481453 GPR75-ASB3A0A0A6YYF3 556 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 IFIT1BQ5T764 474 aaKnown RBP21.28■■□□□ 1
MRPL28-209ENST00000481453 DRC7Q8IY82 874 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 TRIM5Q9C035 493 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 POLR3EQ9NVU0 708 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 CCDC196A0A1B0GTZ2 297 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 NMT2O60551 498 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 SLC3A2P08195 630 aaKnown RBP21.28■■□□□ 1
MRPL28-209ENST00000481453 PTGS1P23219 599 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 BTDP43251 543 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 SLC4A8Q2Y0W8 1093 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 LINC00301Q8NCQ3 95 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 MASTLQ96GX5 879 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 GOLPH3LQ9H4A5 285 aa21.28■■□□□ 1
MRPL28-209ENST00000481453 TROAPQ12815 778 aa21.27■■□□□ 1
MRPL28-209ENST00000481453 CCAR1Q8IX12 1150 aaKnown RBP21.27■■□□□ 1
MRPL28-209ENST00000481453 TBC1D22AQ8WUA7 517 aa21.27■■□□□ 1
MRPL28-209ENST00000481453 TGFBRAP1Q8WUH2 860 aa21.27■■□□□ 1
MRPL28-209ENST00000481453 FAM163AQ96GL9 167 aaPredicted RBP21.27■■□□□ 1
MRPL28-209ENST00000481453 GAKO14976 1311 aa21.27■■□□□ 1
MRPL28-209ENST00000481453 RIMBP2O15034 1052 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 CAVIN2O95810 425 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 ALDH1B1P30837 517 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 PDE4BQ07343 736 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 FUT2Q10981 343 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 COA1Q9GZY4 146 aa21.27■□□□□ 0.99
MRPL28-209ENST00000481453 YEATS4O95619 227 aa21.26■□□□□ 0.99
MRPL28-209ENST00000481453 U2AF2P26368 475 aaKnown RBP eCLIP21.26■□□□□ 0.99
MRPL28-209ENST00000481453 ZNF75DP51815 510 aa21.26■□□□□ 0.99
MRPL28-209ENST00000481453 DYNLL2Q96FJ2 89 aa21.26■□□□□ 0.99
MRPL28-209ENST00000481453 NOL10Q9BSC4 688 aaKnown RBP21.26■□□□□ 0.99
MRPL28-209ENST00000481453 PPP2R5BQ15173 497 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 CCDC186Q7Z3E2 898 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
MRPL28-209ENST00000481453 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 PLA2G4DQ86XP0 818 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 TRIM22Q8IYM9 498 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 WASF1Q92558 559 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 PCDHA7Q9UN72 937 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 CTAGE5O15320 804 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 RHBDL3P58872 404 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 GTF2IP78347 998 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 EZH2Q15910 746 aaKnown RBP21.25■□□□□ 0.99
MRPL28-209ENST00000481453 RCSD1Q6JBY9 416 aa21.25■□□□□ 0.99
MRPL28-209ENST00000481453 MYH6P13533 1939 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 DDAH1O94760 285 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 DEXIO95424 95 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 ME1P48163 572 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 CCDC73Q6ZRK6 1079 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-209ENST00000481453 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 MAPKAPK5Q8IW41 473 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
MRPL28-209ENST00000481453 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 FOCADQ5VW36 1801 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 SNW1Q13573 536 aaKnown RBP21.24■□□□□ 0.99
MRPL28-209ENST00000481453 TRIM29Q14134 588 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 ANO1Q5XXA6 986 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-209ENST00000481453 ENGASEQ8NFI3 743 aa21.24■□□□□ 0.99
MRPL28-209ENST00000481453 PLEKHA8P1O95397 391 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 MMP1P03956 469 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 PLCD1P51178 756 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 STK38Q15208 465 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 SLC15A2Q16348 729 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 CERS5Q8N5B7 392 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 SHISA4Q96DD7 197 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 RNF26Q9BY78 433 aaPredicted RBP21.23■□□□□ 0.99
MRPL28-209ENST00000481453 TSPY2A6NKD2 308 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 CALM1P0DP23 149 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 CALM2P0DP24 149 aa21.23■□□□□ 0.99
MRPL28-209ENST00000481453 CALM3P0DP25 149 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms