RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 NKPD1Q17RQ9 610 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
PTPN12-211ENST00000481154 PRAMEF13Q5VWM6 474 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 HID1Q8IV36 788 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 RIN3Q8TB24 985 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 ADAMTS6Q9UKP5 1117 aa8.38□□□□□ -1.07
PTPN12-211ENST00000481154 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
PTPN12-211ENST00000481154 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 GNAT3A8MTJ3 354 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
PTPN12-211ENST00000481154 FUT4P22083 530 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 ITGAEP38570 1179 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 NOC4LQ9BVI4 516 aaKnown RBP8.37□□□□□ -1.07
PTPN12-211ENST00000481154 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
PTPN12-211ENST00000481154 PGRP06401 933 aa8.36□□□□□ -1.07
PTPN12-211ENST00000481154 TSNAXIP1Q2TAA8 658 aa8.36□□□□□ -1.07
PTPN12-211ENST00000481154 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
PTPN12-211ENST00000481154 ITGB5P18084 799 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 CAP2P40123 477 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 LETMD1Q6P1Q0 360 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
PTPN12-211ENST00000481154 MFSD2AQ8NA29 543 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
PTPN12-211ENST00000481154 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
PTPN12-211ENST00000481154 TJP2Q9UDY2 1190 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
PTPN12-211ENST00000481154 ARID1BQ8NFD5 2236 aaPredicted RBP8.35□□□□□ -1.07
PTPN12-211ENST00000481154 CST3P01034 146 aaPredicted RBP8.34□□□□□ -1.07
PTPN12-211ENST00000481154 RLBP1P12271 317 aa8.34□□□□□ -1.07
PTPN12-211ENST00000481154 RPL6Q02878 288 aaKnown RBP8.34□□□□□ -1.07
PTPN12-211ENST00000481154 IKZF1Q13422 519 aa8.34□□□□□ -1.07
PTPN12-211ENST00000481154 ANGEL2Q5VTE6 544 aaKnown RBP8.34□□□□□ -1.07
PTPN12-211ENST00000481154 PI4K2BQ8TCG2 481 aa8.34□□□□□ -1.07
PTPN12-211ENST00000481154 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
PTPN12-211ENST00000481154 SNX11Q9Y5W9 270 aa8.34□□□□□ -1.07
PTPN12-211ENST00000481154 PAPLNO95428 1278 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 PF4P02776 101 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 FZD5Q13467 585 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 SFRP5Q5T4F7 317 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 CDKAL1Q5VV42 579 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 CDH24Q86UP0 819 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 TMEM87BQ96K49 555 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 BCL11AQ9H165 835 aa8.33□□□□□ -1.08
PTPN12-211ENST00000481154 PITPNM2Q9BZ72 1349 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 FAM155AB1AL88 458 aaPredicted RBP8.32□□□□□ -1.08
PTPN12-211ENST00000481154 CBX7O95931 251 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 FAM160A1Q05DH4 1040 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
PTPN12-211ENST00000481154 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 ASB11Q8WXH4 323 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
PTPN12-211ENST00000481154 HSPA12BQ96MM6 686 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
PTPN12-211ENST00000481154 F13A1P00488 732 aa8.31□□□□□ -1.08
PTPN12-211ENST00000481154 GBP2P32456 591 aaPredicted RBP8.31□□□□□ -1.08
PTPN12-211ENST00000481154 CLCN7P51798 805 aa8.31□□□□□ -1.08
PTPN12-211ENST00000481154 MRPL41Q8IXM3 137 aaKnown RBP8.31□□□□□ -1.08
PTPN12-211ENST00000481154 CAPN6Q9Y6Q1 641 aa8.31□□□□□ -1.08
PTPN12-211ENST00000481154 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 H3BS24 57 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 CILPO75339 1184 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 JUNBP17275 347 aaPredicted RBP8.3□□□□□ -1.08
PTPN12-211ENST00000481154 LMNB2Q03252 620 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 ZP2Q05996 745 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 PDE4BQ07343 736 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 RELL1Q8IUW5 271 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 RHOVQ96L33 236 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 TMEM74Q96NL1 305 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 ATP13A1Q9HD20 1204 aa8.3□□□□□ -1.08
PTPN12-211ENST00000481154 FAM221AA4D161 298 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 BPNT1O95861 308 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 ZNF865P0CJ78 1059 aaPredicted RBP8.29□□□□□ -1.08
PTPN12-211ENST00000481154 PLCG1P19174 1290 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 SLC6A19Q695T7 634 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 GATAD2BQ8WXI9 593 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 ASIC4Q96FT7 647 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 SEMA3GQ9NS98 782 aa8.29□□□□□ -1.08
PTPN12-211ENST00000481154 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 GRIN3BO60391 1043 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 SLC23A3Q6PIS1 610 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 C22orf34Q6ZV56 151 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 MCATQ8IVS2 390 aaKnown RBP8.28□□□□□ -1.08
PTPN12-211ENST00000481154 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 ADAM30Q9UKF2 790 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 ST14Q9Y5Y6 855 aa8.28□□□□□ -1.08
PTPN12-211ENST00000481154 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
PTPN12-211ENST00000481154 MRPL58Q14197 206 aaKnown RBP8.27□□□□□ -1.09
PTPN12-211ENST00000481154 SNAP47Q5SQN1 464 aa8.27□□□□□ -1.09
PTPN12-211ENST00000481154 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
PTPN12-211ENST00000481154 CCDC84Q86UT8 332 aaPredicted RBP8.27□□□□□ -1.09
PTPN12-211ENST00000481154 GOLM1Q8NBJ4 401 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms