RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 ARHGEF10O15013 1369 aa8.21□□□□□ -1.1
PKP4-211ENST00000481115 USP31Q70CQ4 1352 aa8.21□□□□□ -1.1
PKP4-211ENST00000481115 PNPLA6Q8IY17 1366 aa8.21□□□□□ -1.1
PKP4-211ENST00000481115 GOLGA6L19H0YKK7 550 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 POLR3GO15318 223 aaPredicted RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 ZSCAN12O43309 604 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 SASH1O94885 1247 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 ELF1P32519 619 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 KRT85P78386 507 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 APOBRQ0VD83 1088 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 PSMD2Q13200 908 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 DRP2Q13474 957 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 HSP90B2PQ58FF3 399 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 WLSQ5T9L3 541 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 BRICD5Q6PL45 260 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 BLOC1S3Q6QNY0 202 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 RSRC2Q7L4I2 434 aaKnown RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 SAMD7Q7Z3H4 446 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 YTHDF3Q7Z739 585 aaKnown RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 LRRC59Q96AG4 307 aaKnown RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 CABS1Q96KC9 395 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 ARHGAP9Q9BRR9 750 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 CLSTN2Q9H4D0 955 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 VTI1BQ9UEU0 232 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 RAB21Q9UL25 225 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.2□□□□□ -1.1
PKP4-211ENST00000481115 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 OVOS2A0A0J9YW53 1432 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 OVOS2Q6IE36 1432 aa8.2□□□□□ -1.1
PKP4-211ENST00000481115 SLIT3O75094 1523 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 SRRM3A6NNA2 597 aaPredicted RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 GPTP24298 496 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 HNRNPH1P31943 449 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 PRPHP41219 470 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 ZNF165P49910 485 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 LMNB2Q03252 620 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 EHHADHQ08426 723 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 LRMPQ12912 555 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 GRIK3Q13003 919 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 KIF4BQ2VIQ3 1234 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 PREPLQ4J6C6 727 aaPredicted RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 GORABQ5T7V8 394 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 AP1ARQ63HQ0 302 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 RCSD1Q6JBY9 416 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 KIAA1328Q86T90 577 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 APLFQ8IW19 511 aaPredicted RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 CEP112Q8N8E3 955 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 ZBTB9Q96C00 473 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 PURBQ96QR8 312 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 BPIFA3Q9BQP9 254 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 PAGR1Q9BTK6 254 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 NAT10Q9H0A0 1025 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 TNMDQ9H2S6 317 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 TMX1Q9H3N1 280 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 SPATS2LQ9NUQ6 558 aaKnown RBP8.19□□□□□ -1.1
PKP4-211ENST00000481115 TNNQ9UQP3 1299 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 JCADQ9P266 1359 aa8.19□□□□□ -1.1
PKP4-211ENST00000481115 CCDC69A6NI79 296 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 MAFGO15525 162 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
PKP4-211ENST00000481115 FSBPO95073 299 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 SETSIPP0DME0 302 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 SDSP20132 328 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 DNAJA1P31689 397 aaKnown RBP8.18□□□□□ -1.1
PKP4-211ENST00000481115 TXLNAP40222 546 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 MAPK8P45983 427 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 AARSP49588 968 aaKnown RBP eCLIP8.18□□□□□ -1.1
PKP4-211ENST00000481115 EXOSC9Q06265 439 aaKnown RBP8.18□□□□□ -1.1
PKP4-211ENST00000481115 USP4Q13107 963 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 ATL3Q6DD88 541 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 B4GALNT4Q76KP1 1039 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 ANKRD44Q8N8A2 993 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 TSEN2Q8NCE0 465 aaKnown RBP8.18□□□□□ -1.1
PKP4-211ENST00000481115 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 GOLGA1Q92805 767 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 FAXDC2Q96IV6 333 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 PIF1Q9H611 641 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 ETAA1Q9NY74 926 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 MCM8Q9UJA3 840 aa8.18□□□□□ -1.1
PKP4-211ENST00000481115 MYH15Q9Y2K3 1946 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 EBAG9O00559 213 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 FYB1O15117 783 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 CCNYL3P0C7X3 344 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 NF2P35240 595 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 ARHGAP25P42331 645 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 ARID5AQ03989 594 aa8.17□□□□□ -1.1
PKP4-211ENST00000481115 SART3Q15020 963 aaKnown RBP8.17□□□□□ -1.1
PKP4-211ENST00000481115 IQCB1Q15051 598 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms