RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 SALL3Q9BXA9 1300 aa24.25■■□□□ 1.47
VPS36-204ENST00000480923 MYH1P12882 1939 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 TATDN1Q6P1N9 297 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 APPBP2Q92624 585 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 FSD1Q9BTV5 496 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 LNPKQ9C0E8 428 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 CPA4Q9UI42 421 aa24.24■■□□□ 1.47
VPS36-204ENST00000480923 GH2P01242 217 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 CYP2C8P10632 490 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 CYP2D6P10635 497 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 HMGCS2P54868 508 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 EVX2Q03828 476 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 CERKLQ49MI3 558 aaPredicted RBP24.23■■□□□ 1.47
VPS36-204ENST00000480923 OTOP1Q7RTM1 612 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 AMOTL1Q8IY63 956 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 WDR18Q9BV38 432 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 EFCC1Q9HA90 598 aa24.23■■□□□ 1.47
VPS36-204ENST00000480923 NAV1Q8NEY1 1877 aa24.22■■□□□ 1.47
VPS36-204ENST00000480923 FBXO46Q6PJ61 603 aaPredicted RBP24.22■■□□□ 1.47
VPS36-204ENST00000480923 PROCA1Q8NCQ7 364 aaPredicted RBP24.22■■□□□ 1.47
VPS36-204ENST00000480923 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
VPS36-204ENST00000480923 STAP2Q9UGK3 403 aa24.22■■□□□ 1.47
VPS36-204ENST00000480923 AGTPBP1Q9UPW5 1226 aa24.22■■□□□ 1.47
VPS36-204ENST00000480923 SLC45A1Q9Y2W3 748 aa24.22■■□□□ 1.47
VPS36-204ENST00000480923 DDX60LQ5H9U9 1706 aaKnown RBP24.21■■□□□ 1.47
VPS36-204ENST00000480923 SHMT1P34896 483 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 PDE1AP54750 535 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 GABPAQ06546 454 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 MTMR2Q13614 643 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 KIF22Q14807 665 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 ARHGEF6Q15052 776 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 ABCB5Q2M3G0 1257 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 C17orf99Q6UX52 265 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 STRBPQ96SI9 672 aaKnown RBP24.21■■□□□ 1.47
VPS36-204ENST00000480923 CABP5Q9NP86 173 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 PHIPQ8WWQ0 1821 aa24.21■■□□□ 1.47
VPS36-204ENST00000480923 ADGRA2Q96PE1 1338 aa24.2■■□□□ 1.46
VPS36-204ENST00000480923 ATAD5Q96QE3 1844 aa24.2■■□□□ 1.46
VPS36-204ENST00000480923 TREML2Q5T2D2 321 aa24.2■■□□□ 1.46
VPS36-204ENST00000480923 TMOD4Q9NZQ9 345 aa24.2■■□□□ 1.46
VPS36-204ENST00000480923 HPS5Q9UPZ3 1129 aa24.2■■□□□ 1.46
VPS36-204ENST00000480923 USP17L12C9JPN9 530 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 USP17L21D6R901 530 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 BACE1P56817 501 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 RAB3GAP1Q15042 981 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 SH3D19Q5HYK7 790 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 CHD1LQ86WJ1 897 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 SMCR8Q8TEV9 937 aaPredicted RBP24.19■■□□□ 1.46
VPS36-204ENST00000480923 DYNLL2Q96FJ2 89 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 MYH7P12883 1935 aa24.19■■□□□ 1.46
VPS36-204ENST00000480923 CYP2D7A0A087X1C5 515 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 USP17L10C9JJH3 530 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 GPAA1O43292 621 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 ECM2O94769 699 aaPredicted RBP24.18■■□□□ 1.46
VPS36-204ENST00000480923 LACTBP83111 547 aaPredicted RBP24.18■■□□□ 1.46
VPS36-204ENST00000480923 CAP1Q01518 475 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 NUCB1Q02818 461 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 SWAP70Q9UH65 585 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
VPS36-204ENST00000480923 C19orf81C9J6K1 198 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 M0R2C6 588 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 MPHOSPH10O00566 681 aaKnown RBP24.17■■□□□ 1.46
VPS36-204ENST00000480923 PABPC4Q13310 644 aaKnown RBP eCLIP24.17■■□□□ 1.46
VPS36-204ENST00000480923 C12orf60Q5U649 245 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 SLC44A5Q8NCS7 719 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 EVI5LQ96CN4 794 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 ARHGAP39Q9C0H5 1083 aa24.17■■□□□ 1.46
VPS36-204ENST00000480923 GNAT2P19087 354 aa24.16■■□□□ 1.46
VPS36-204ENST00000480923 CTR9Q6PD62 1173 aa24.16■■□□□ 1.46
VPS36-204ENST00000480923 SEC62Q99442 399 aaKnown RBP24.16■■□□□ 1.46
VPS36-204ENST00000480923 FEZ1Q99689 392 aa24.16■■□□□ 1.46
VPS36-204ENST00000480923 ARPP21Q9UBL0 812 aaPredicted RBP24.16■■□□□ 1.46
VPS36-204ENST00000480923 TAOK2Q9UL54 1235 aa24.16■■□□□ 1.46
VPS36-204ENST00000480923 PTPN22Q9Y2R2 807 aa24.16■■□□□ 1.46
VPS36-204ENST00000480923 GSG1L2A8MUP6 293 aa24.15■■□□□ 1.46
VPS36-204ENST00000480923 APPP05067 770 aa24.15■■□□□ 1.46
VPS36-204ENST00000480923 BCRP11274 1271 aa24.15■■□□□ 1.46
VPS36-204ENST00000480923 OSBPP22059 807 aa24.15■■□□□ 1.46
VPS36-204ENST00000480923 ZYXQ15942 572 aaKnown RBP24.15■■□□□ 1.46
VPS36-204ENST00000480923 PTPRFP10586 1907 aa24.14■■□□□ 1.46
VPS36-204ENST00000480923 SMIM22K7EJ46 135 aa24.14■■□□□ 1.45
VPS36-204ENST00000480923 SEPT2Q15019 361 aa24.14■■□□□ 1.45
VPS36-204ENST00000480923 ZMYM1Q5SVZ6 1142 aa24.14■■□□□ 1.45
VPS36-204ENST00000480923 GIMAP6Q6P9H5 292 aa24.14■■□□□ 1.45
VPS36-204ENST00000480923 USP17L2Q6R6M4 530 aa24.14■■□□□ 1.45
VPS36-204ENST00000480923 PSMC4P43686 418 aa24.13■■□□□ 1.45
VPS36-204ENST00000480923 TDO2P48775 406 aa24.13■■□□□ 1.45
VPS36-204ENST00000480923 CDK8P49336 464 aa24.13■■□□□ 1.45
VPS36-204ENST00000480923 C16orf86Q6ZW13 317 aa24.13■■□□□ 1.45
VPS36-204ENST00000480923 ASCC2Q9H1I8 757 aaPredicted RBP24.13■■□□□ 1.45
VPS36-204ENST00000480923 TRIM6-TRIM34B2RNG4 842 aa24.12■■□□□ 1.45
VPS36-204ENST00000480923 FMNL1O95466 1100 aaPredicted RBP24.12■■□□□ 1.45
VPS36-204ENST00000480923 GUCY1A2P33402 732 aa24.12■■□□□ 1.45
VPS36-204ENST00000480923 IRX3P78415 501 aaPredicted RBP24.12■■□□□ 1.45
VPS36-204ENST00000480923 ACER1Q8TDN7 264 aa24.12■■□□□ 1.45
VPS36-204ENST00000480923 EMILIN3Q9NT22 766 aa24.12■■□□□ 1.45
VPS36-204ENST00000480923 LOC285556D6RIA3 1793 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 MINDY4BA8MYZ0 360 aa24.11■■□□□ 1.45
VPS36-204ENST00000480923 PATL2C9JE40 543 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms