RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 GNPTABQ3T906 1256 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 MFSD14CQ5VZR4 134 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 ZSCAN30Q86W11 494 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 SPATA32Q96LK8 384 aa6.83□□□□□ -1.32
CPS1-207ENST00000479988 LLPHQ9BRT6 129 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 ADD3Q9UEY8 706 aaKnown RBP6.83□□□□□ -1.32
CPS1-207ENST00000479988 USP17L12C9JPN9 530 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 USP17L21D6R901 530 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 CTAGE5O15320 804 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 CETPP11597 493 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 HAUS7Q99871 368 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 MTIF3Q9H2K0 278 aaKnown RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 LMBRD1Q9NUN5 540 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 PIK3C2AO00443 1686 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 VIRMAQ69YN4 1812 aaKnown RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 BECN2A8MW95 431 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 SLC27A2O14975 620 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 IGKV5-2P06315 115 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 ALAS1P13196 640 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 RPS6KB1P23443 525 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 SP4Q02446 784 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 NOGQ13253 232 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 SAMD7Q7Z3H4 446 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 RBM46Q8TBY0 533 aaKnown RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 LBHD1Q9BQE6 289 aaPredicted RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 DSCC1Q9BVC3 393 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 NAT10Q9H0A0 1025 aaKnown RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 AZI2Q9H6S1 392 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 KANSL2Q9H9L4 492 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 ELP3Q9H9T3 547 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 BCL9LQ86UU0 1499 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 GNA11P29992 359 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 MAP2K1Q02750 393 aaPredicted RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 APBB1IPQ7Z5R6 666 aaPredicted RBP6.82□□□□□ -1.32
CPS1-207ENST00000479988 NUP62CLQ9H1M0 184 aa6.82□□□□□ -1.32
CPS1-207ENST00000479988 KINO60870 393 aaKnown RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 PRDM1O75626 825 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CD2BP2O95400 341 aaKnown RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 PDE6AP16499 860 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 SYT1P21579 422 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 TFAP4Q01664 338 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 DIXDC1Q155Q3 683 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 RABL6Q3YEC7 729 aaPredicted RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 PLCD4Q9BRC7 762 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 COL14A1Q05707 1796 aaKnown RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 CCL15-CCL14A0A0B4J2E2 113 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 SYCE3A1L190 88 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 GLTPD2A6NH11 291 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 TOMM70O94826 608 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 DDIT3P35638 169 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CXCL9Q07325 125 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 MAP3K11Q16584 847 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CCL15Q16663 113 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CCDC174Q6PII3 467 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 EP400NLQ6ZTU2 488 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPS1-207ENST00000479988 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 DKC1O60832 514 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPS1-207ENST00000479988 MYCLP12524 364 aaPredicted RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 CALML3P27482 149 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 PTPN12Q05209 780 aaKnown RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 DDR1Q08345 913 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CHST3Q7LGC8 479 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 ZHX1Q9UKY1 873 aaPredicted RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 AHDC1Q5TGY3 1603 aaPredicted RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 TPM1P09493 284 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 PDE4DQ08499 809 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 TNMDQ9H2S6 317 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 SLIT3O75094 1523 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 PEAK1Q9H792 1746 aa6.81□□□□□ -1.32
CPS1-207ENST00000479988 CHD2O14647 1828 aaKnown RBP6.81□□□□□ -1.32
CPS1-207ENST00000479988 NFAT5O94916 1531 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 POTEB2H3BUK9 544 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 LIG1P18858 919 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 COPB2P35606 906 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 PTF1AQ7RTS3 328 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 DEFB129Q9H1M3 183 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 HOXC10Q9NYD6 342 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 FAM13BQ9NYF5 915 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 KLF18A0A0U1RQI7 1052 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 TMEM88BA6NKF7 163 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 CACNB3P54284 484 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 NLGN2Q8NFZ4 835 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
CPS1-207ENST00000479988 C8orf76Q96K31 380 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 ALDH8A1Q9H2A2 487 aaPredicted RBP6.8□□□□□ -1.32
CPS1-207ENST00000479988 PPP2R3BQ9Y5P8 575 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 MANSC4A6NHS7 340 aaPredicted RBP6.8□□□□□ -1.32
CPS1-207ENST00000479988 GDF11O95390 407 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 GTF2A2P52657 109 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 NECTIN1Q15223 517 aa6.8□□□□□ -1.32
CPS1-207ENST00000479988 SLC10A5Q5PT55 438 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms