RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ZSWIM6Q9HCJ5 1215 aa14.82□□□□□ -0.04
TRAPPC12-218ENST00000479897 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
TRAPPC12-218ENST00000479897 PASKQ96RG2 1323 aa14.82□□□□□ -0.04
TRAPPC12-218ENST00000479897 MYH4Q9Y623 1939 aa14.82□□□□□ -0.04
TRAPPC12-218ENST00000479897 UNCXA6NJT0 531 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 B4E1Z4 1266 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 KDM4AO75164 1064 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 SLURP2P0DP57 97 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 RABEP1Q15276 862 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 CERKLQ49MI3 558 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 NOL9Q5SY16 702 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 MIGA2Q7L4E1 593 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 KLRG1Q96E93 195 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 INCENPQ9NQS7 918 aa14.81□□□□□ -0.04
TRAPPC12-218ENST00000479897 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 TRAF5O00463 557 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 RANBP6O60518 1105 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 RPS6KB1P23443 525 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 MCM5P33992 734 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 CAP2P40123 477 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 NOVP48745 357 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 ANTXR2P58335 489 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 EXOSC10Q01780 885 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 RRP1BQ14684 758 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 CCDC178Q5BJE1 867 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 DHX32Q7L7V1 743 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
TRAPPC12-218ENST00000479897 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 USP2O75604 605 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 ASNSP08243 561 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 TSPY3P0CV98 308 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 TSPY8P0CW00 308 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 AKR1B1P15121 316 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 FSTL1Q12841 308 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 COL9A3Q14050 684 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 ABCB5Q2M3G0 1257 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 RRP12Q5JTH9 1297 aaKnown RBP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 TMEM179Q6ZVK1 233 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 CYB5R4Q7L1T6 521 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 IQCA1Q86XH1 822 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 WRNIP1Q96S55 665 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 AGXT2Q9BYV1 514 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 ZSWIM5Q9P217 1185 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 ZBTB21Q9ULJ3 1066 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
TRAPPC12-218ENST00000479897 PTPRFP10586 1907 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 PRC1O43663 620 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 TFAP4Q01664 338 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 SCYL3Q8IZE3 742 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 TTC14Q96N46 770 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 CABP5Q9NP86 173 aa14.78□□□□□ -0.04
TRAPPC12-218ENST00000479897 TNKSO95271 1327 aa14.77□□□□□ -0.04
TRAPPC12-218ENST00000479897 GDF11O95390 407 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 INPP5BP32019 993 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 GUCY1A2P33402 732 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 SART3Q15020 963 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 SEC23AQ15436 765 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 ARMC9Q7Z3E5 817 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 ANKRD13AQ8IZ07 590 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 ANKS1AQ92625 1134 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 ZSCAN10Q96SZ4 725 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 UPF3BQ9BZI7 483 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 GBA2Q9HCG7 927 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.05
TRAPPC12-218ENST00000479897 SH2B2O14492 632 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 CELF2O95319 508 aaKnown RBP14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 GH2P01242 217 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 LIFRP42702 1097 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 JAG1P78504 1218 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 MAP3K9P80192 1104 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 FMR1Q06787 632 aaKnown RBP eCLIP14.76□□□□□ -0.052e-13■■■■■ 47.4
TRAPPC12-218ENST00000479897 LDLRAD1Q5T700 205 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 SGMS1Q86VZ5 419 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 DGKHQ86XP1 1220 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 IGDCC4Q8TDY8 1250 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 UBAC1Q9BSL1 405 aa14.76□□□□□ -0.05
TRAPPC12-218ENST00000479897 KANSL2Q9H9L4 492 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms