RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 TNPO2O14787 897 aaKnown RBP17.4■□□□□ 0.38
ATG4B-218ENST00000479554 FAM110CQ1W6H9 321 aa17.4■□□□□ 0.38
ATG4B-218ENST00000479554 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
ATG4B-218ENST00000479554 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
ATG4B-218ENST00000479554 ZBTB21Q9ULJ3 1066 aa17.4■□□□□ 0.38
ATG4B-218ENST00000479554 GOLIM4O00461 696 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-218ENST00000479554 JAG1P78504 1218 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 MTFR1Q15390 333 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 SLC9C2Q5TAH2 1124 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 SLAIN1Q8ND83 568 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 BIN2Q9UBW5 565 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-218ENST00000479554 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 NAV1Q8NEY1 1877 aa17.39■□□□□ 0.37
ATG4B-218ENST00000479554 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
ATG4B-218ENST00000479554 MAGEB6P1A0A0J9YX57 407 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 PDE6AP16499 860 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 BACE1P56817 501 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 UBXN2AP68543 259 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-218ENST00000479554 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-218ENST00000479554 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 RIOK1Q9BRS2 568 aaKnown RBP17.38■□□□□ 0.37
ATG4B-218ENST00000479554 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-218ENST00000479554 EHD4Q9H223 541 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 SERPINB13Q9UIV8 391 aa17.38■□□□□ 0.37
ATG4B-218ENST00000479554 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
ATG4B-218ENST00000479554 GH2P01242 217 aa17.37■□□□□ 0.37
ATG4B-218ENST00000479554 FLT3LGP49771 235 aa17.37■□□□□ 0.37
ATG4B-218ENST00000479554 COA7Q96BR5 231 aa17.37■□□□□ 0.37
ATG4B-218ENST00000479554 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
ATG4B-218ENST00000479554 C19orf81C9J6K1 198 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 ADCY3O60266 1144 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 SLC34A2O95436 690 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 NEFLP07196 543 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 CCL5P13501 91 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 TATDN1Q6P1N9 297 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
ATG4B-218ENST00000479554 CRNKL1Q9BZJ0 848 aaKnown RBP17.36■□□□□ 0.37
ATG4B-218ENST00000479554 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
ATG4B-218ENST00000479554 POLR3DP05423 398 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-218ENST00000479554 IRF5Q13568 498 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 NKX2-3Q8TAU0 364 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 RNF208Q9H0X6 261 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 TAOK2Q9UL54 1235 aa17.35■□□□□ 0.37
ATG4B-218ENST00000479554 TCRBV5S4A2TA0A5A2 114 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 ELNP15502 786 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 ATP5JP18859 108 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 HOXA7P31268 230 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-218ENST00000479554 CERKLQ49MI3 558 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-218ENST00000479554 USP17L2Q6R6M4 530 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 PXYLP1Q8TE99 480 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 SHISA4Q96DD7 197 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 FEZ1Q99689 392 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 MORF4L1Q9UBU8 362 aa17.34■□□□□ 0.37
ATG4B-218ENST00000479554 INHAP05111 366 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 GJB1P08034 283 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 PLCD1P51178 756 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 HERVK_113P62684 666 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 LCORLQ8N3X6 602 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 HAUS7Q99871 368 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■□□□ 13.1
ATG4B-218ENST00000479554 CABP5Q9NP86 173 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 MCM9Q9NXL9 1143 aa17.33■□□□□ 0.36
ATG4B-218ENST00000479554 SHMT1P34896 483 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 GJA8P48165 433 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
ATG4B-218ENST00000479554 SDR42E1Q8WUS8 393 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 P2RX7Q99572 595 aaKnown RBP17.32■□□□□ 0.36
ATG4B-218ENST00000479554 UNC93B1Q9H1C4 597 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
ATG4B-218ENST00000479554 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
ATG4B-218ENST00000479554 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-218ENST00000479554 MBD4O95243 580 aa17.31■□□□□ 0.36
ATG4B-218ENST00000479554 ADD2P35612 726 aa17.31■□□□□ 0.36
ATG4B-218ENST00000479554 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-218ENST00000479554 C12orf42Q96LP6 360 aa17.31■□□□□ 0.36
ATG4B-218ENST00000479554 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
ATG4B-218ENST00000479554 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-218ENST00000479554 USP14P54578 494 aa17.3■□□□□ 0.36
ATG4B-218ENST00000479554 GABPAQ06546 454 aa17.3■□□□□ 0.36
ATG4B-218ENST00000479554 GPRC5AQ8NFJ5 357 aa17.3■□□□□ 0.36
ATG4B-218ENST00000479554 MYH7P12883 1935 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 EVX2Q03828 476 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 SLFNL1Q499Z3 407 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
ATG4B-218ENST00000479554 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 KIAA1683Q9H0B3 1180 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 TXNRD2Q9NNW7 524 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 ATP8A2Q9NTI2 1148 aa17.29■□□□□ 0.36
ATG4B-218ENST00000479554 DOCK3Q8IZD9 2030 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L15C9J2P7 530 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms