RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ALX3O95076 343 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 DRD2P14416 443 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 GLB1P16278 677 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 NOS3P29474 1203 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 NTF4P34130 210 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 ASPAP45381 313 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 PREPP48147 710 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 TTLL4Q14679 1199 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 CDC37L1Q7L3B6 337 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 TXNRD3Q86VQ6 643 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 LSRQ86X29 649 aaPredicted RBP7.6□□□□□ -1.19
RFC4-212ENST00000479307 HID1Q8IV36 788 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 TM9SF2Q99805 663 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 YIPF2Q9BWQ6 316 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 MRVI1Q9Y6F6 885 aa7.6□□□□□ -1.19
RFC4-212ENST00000479307 GAS2O43903 313 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 CAP2P40123 477 aa7.59□□□□□ -1.19
RFC4-212ENST00000479307 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 MCATQ8IVS2 390 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 TAB3Q8N5C8 712 aaPredicted RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 C19orf47Q8N9M1 422 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 FAM46AQ96IP4 442 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
RFC4-212ENST00000479307 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
RFC4-212ENST00000479307 NEFMP07197 916 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 HCLS1P14317 486 aaPredicted RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 ETFBP38117 255 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 IREB2P48200 963 aaKnown RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 USP11P51784 963 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 YARSP54577 528 aaKnown RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 SLC6A19Q695T7 634 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 SMYD4Q8IYR2 804 aaPredicted RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 DZIP1LQ8IYY4 767 aaKnown RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 R3HCC1Q9Y3T6 440 aaKnown RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 TARBP1Q13395 1621 aaKnown RBP7.58□□□□□ -1.2
RFC4-212ENST00000479307 SYNJ1O43426 1573 aa7.58□□□□□ -1.2
RFC4-212ENST00000479307 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 INTS3Q68E01 1043 aaKnown RBP7.57□□□□□ -1.2
RFC4-212ENST00000479307 OVOS1Q6IE37 1185 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 NLRC3Q7RTR2 1065 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 ISL2Q96A47 359 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 UBL7Q96S82 380 aaPredicted RBP7.57□□□□□ -1.2
RFC4-212ENST00000479307 ACSS3Q9H6R3 686 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 TJP2Q9UDY2 1190 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 PCOLCE2Q9UKZ9 415 aa7.57□□□□□ -1.2
RFC4-212ENST00000479307 GAPVD1Q14C86 1478 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
RFC4-212ENST00000479307 GUCY2CP25092 1073 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 CASP7P55210 303 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 ANKS3Q6ZW76 656 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 FAM13CQ8NE31 585 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
RFC4-212ENST00000479307 UTP4Q969X6 686 aaKnown RBP7.56□□□□□ -1.2
RFC4-212ENST00000479307 MYRFLQ96LU7 910 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
RFC4-212ENST00000479307 KLHL3Q9UH77 587 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
RFC4-212ENST00000479307 HECW2Q9P2P5 1572 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 WIZO95785 1651 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 TNFRSF10CO14798 259 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
RFC4-212ENST00000479307 IGHA1P01876 353 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 NME1P15531 152 aaKnown RBP7.55□□□□□ -1.2
RFC4-212ENST00000479307 CCNFP41002 786 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 DPH6Q7L8W6 267 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.55□□□□□ -1.2
RFC4-212ENST00000479307 FAM169BQ8N8A8 192 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 ATG4CQ96DT6 458 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 MEGF10Q96KG7 1140 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 FBRSQ9HAH7 460 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 ACTR10Q9NZ32 417 aa7.55□□□□□ -1.2
RFC4-212ENST00000479307 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 KLF4O43474 513 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 DNAJA2O60884 412 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 LRIG2O94898 1065 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 CST3P01034 146 aaPredicted RBP7.54□□□□□ -1.2
RFC4-212ENST00000479307 RAB6AP20340 208 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 CHRNA4P43681 627 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 RAB33AQ14088 237 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 MAP7Q14244 749 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 SLBPQ14493 270 aaKnown RBP eCLIP7.54□□□□□ -1.2
RFC4-212ENST00000479307 CDPF1Q6NVV7 123 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 PMFBP1Q8TBY8 1022 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 SEMA6CQ9H3T2 930 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
RFC4-212ENST00000479307 AQRO60306 1485 aaKnown RBP eCLIP7.54□□□□□ -1.2
RFC4-212ENST00000479307 CHURC1-FNTBB4DL54 471 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms