RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
USP30-206ENST00000479219 MYL10Q9BUA6 226 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
USP30-206ENST00000479219 TNKSO95271 1327 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 ADAMTS2O95450 1211 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 FGRP09769 529 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 PTPREP23469 700 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 SEC23AQ15436 765 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 PTPN14Q15678 1187 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.85
USP30-206ENST00000479219 MIGA1Q8NAN2 632 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.85
USP30-206ENST00000479219 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.85
USP30-206ENST00000479219 ABCF2Q9UG63 623 aa9.71□□□□□ -0.85
USP30-206ENST00000479219 GTF2E1P29083 439 aaPredicted RBP9.71□□□□□ -0.86
USP30-206ENST00000479219 CCZ1BP86790 482 aa9.71□□□□□ -0.86
USP30-206ENST00000479219 CCZ1P86791 482 aaPredicted RBP9.71□□□□□ -0.86
USP30-206ENST00000479219 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
USP30-206ENST00000479219 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 PSDA5PKW4 1024 aaPredicted RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 NCAPHQ15003 741 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 IFIT1BQ5T764 474 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 NT5DC1Q5TFE4 455 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 NYAP1Q6ZVC0 841 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 MLKLQ8NB16 471 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 PYM1Q9BRP8 204 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 IFNKQ9P0W0 207 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 MINPP1Q9UNW1 487 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 MINDY4BA8MYZ0 360 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 BIN1O00499 593 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 ORC4O43929 436 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 ERCC4Q92889 916 aaPredicted RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 CRNKL1Q9BZJ0 848 aaKnown RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 ATP8A2Q9NTI2 1148 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 FBXO2Q9UK22 296 aaPredicted RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 COL1A1P02452 1464 aaPredicted RBP9.7□□□□□ -0.86
USP30-206ENST00000479219 NHSQ6T4R5 1651 aa9.7□□□□□ -0.86
USP30-206ENST00000479219 SNAP23O00161 211 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 KRT2P35908 639 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 GYG1P46976 350 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 FANCCQ00597 558 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 FBXO33Q7Z6M2 555 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 CCAR2Q8N163 923 aaKnown RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 KRT222Q8N1A0 295 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 FERMT2Q96AC1 680 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 ARPP21Q9UBL0 812 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 TRIM75PA6NK02 468 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 POSTNQ15063 836 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 TMC6Q7Z403 805 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 METTL16Q86W50 562 aaKnown RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 KIF18AQ8NI77 898 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 ZKSCAN3Q9BRR0 538 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 NARFQ9UHQ1 456 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 TAF1P21675 1872 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 SERPINC1P01008 464 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 SLFN14P0C7P3 912 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 FAM193AP78312 1265 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 PNOCQ13519 176 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 LONRF3Q496Y0 759 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 ENAHQ8N8S7 591 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 SDR42E1Q8WUS8 393 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 SMARCE1Q969G3 411 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 FAM84BQ96KN1 310 aaPredicted RBP9.69□□□□□ -0.86
USP30-206ENST00000479219 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
USP30-206ENST00000479219 AATFQ9NY61 560 aaKnown RBP eCLIP9.69□□□□□ -0.86
USP30-206ENST00000479219 BTAF1O14981 1849 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
USP30-206ENST00000479219 UBASH3AP57075 661 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 RPS8P62241 208 aaKnown RBP9.68□□□□□ -0.86
USP30-206ENST00000479219 SBK1Q52WX2 424 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 ADGRA1Q86SQ6 560 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 CREBRFQ8IUR6 639 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 FAM177A1Q8N128 213 aaPredicted RBP9.68□□□□□ -0.86
USP30-206ENST00000479219 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 CTCFLQ8NI51 663 aaPredicted RBP9.68□□□□□ -0.86
USP30-206ENST00000479219 CLIC6Q96NY7 704 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 COL4A1P02462 1669 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
USP30-206ENST00000479219 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 TRAPPC10P48553 1259 aa9.68□□□□□ -0.86
USP30-206ENST00000479219 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms