RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
RCC1-211ENST00000478232 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 TNPO2O14787 897 aaKnown RBP16.68■□□□□ 0.26
RCC1-211ENST00000478232 MYCP01106 439 aaPredicted RBP16.68■□□□□ 0.26
RCC1-211ENST00000478232 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
RCC1-211ENST00000478232 PRKCZQ05513 592 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 MTMR2Q13614 643 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 FAM110CQ1W6H9 321 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
RCC1-211ENST00000478232 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 BIN2Q9UBW5 565 aaPredicted RBP16.68■□□□□ 0.26
RCC1-211ENST00000478232 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
RCC1-211ENST00000478232 GDF11O95390 407 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 POLR3DP05423 398 aaPredicted RBP16.67■□□□□ 0.26
RCC1-211ENST00000478232 FLT3LGP49771 235 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 SLAIN1Q8ND83 568 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 COA7Q96BR5 231 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 HAUS7Q99871 368 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 GABRQQ9UN88 632 aa16.67■□□□□ 0.26
RCC1-211ENST00000478232 MYO5AQ9Y4I1 1855 aaKnown RBP16.67■□□□□ 0.26
RCC1-211ENST00000478232 KIAA0100Q14667 2235 aaKnown RBP16.66■□□□□ 0.26
RCC1-211ENST00000478232 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 GH2P01242 217 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 PLCD1P51178 756 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 UBXN2AP68543 259 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
RCC1-211ENST00000478232 IRF5Q13568 498 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
RCC1-211ENST00000478232 PXYLP1Q8TE99 480 aa16.66■□□□□ 0.26
RCC1-211ENST00000478232 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
RCC1-211ENST00000478232 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.26
RCC1-211ENST00000478232 ADCY3O60266 1144 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 MTFR1Q15390 333 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 SHROOM1Q2M3G4 852 aaPredicted RBP16.65■□□□□ 0.26
RCC1-211ENST00000478232 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 P2RX7Q99572 595 aaKnown RBP16.65■□□□□ 0.26
RCC1-211ENST00000478232 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 MCM9Q9NXL9 1143 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
RCC1-211ENST00000478232 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 GJB1P08034 283 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 CCL5P13501 91 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 ADD2P35612 726 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 PTPRFP10586 1907 aa16.64■□□□□ 0.25
RCC1-211ENST00000478232 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
RCC1-211ENST00000478232 SHMT1P34896 483 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 GABPAQ06546 454 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 UBE3CQ15386 1083 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 DCP1AQ9NPI6 582 aaPredicted RBP16.63■□□□□ 0.25
RCC1-211ENST00000478232 ATP8A2Q9NTI2 1148 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
RCC1-211ENST00000478232 RBBP6Q7Z6E9 1792 aaKnown RBP16.62■□□□□ 0.25
RCC1-211ENST00000478232 CAPN2P17655 700 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 GJA8P48165 433 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 USP14P54578 494 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 HERVK_113P62684 666 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 GPRC5AQ8NFJ5 357 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
RCC1-211ENST00000478232 SDR42E1Q8WUS8 393 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 KIAA1683Q9H0B3 1180 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 CDK5RAP2Q96SN8 1893 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 CENPFP49454 3210 aa16.62■□□□□ 0.25
RCC1-211ENST00000478232 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 ELNP15502 786 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 FEZ1Q99689 392 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 RBPJLQ9UBG7 517 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
RCC1-211ENST00000478232 LOC285556D6RIA3 1793 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 MBD4O95243 580 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 SWAP70Q9UH65 585 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 MYH1P12882 1939 aa16.6■□□□□ 0.25
RCC1-211ENST00000478232 PRKAB2O43741 272 aa16.59■□□□□ 0.25
RCC1-211ENST00000478232 INHAP05111 366 aa16.59■□□□□ 0.25
RCC1-211ENST00000478232 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms