RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 TRIM32Q13049 653 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 MAP3K21Q5TCX8 1036 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 NAA16Q6N069 864 aaPredicted RBP11.86□□□□□ -0.51
CCM2-210ENST00000478169 C7orf61Q8IZ16 206 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 GTF3C2Q8WUA4 911 aaPredicted RBP11.86□□□□□ -0.51
CCM2-210ENST00000478169 SOCS4Q8WXH5 440 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 TRIB2Q92519 343 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 P2RX7Q99572 595 aaKnown RBP11.86□□□□□ -0.51
CCM2-210ENST00000478169 GPR108Q9NPR9 543 aa11.86□□□□□ -0.51
CCM2-210ENST00000478169 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCM2-210ENST00000478169 COL6A3P12111 3177 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 CYP2B6P20813 491 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 MAPK4P31152 587 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 HERVK_113P62684 666 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 LRIT3Q3SXY7 679 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 ZMYND8Q9ULU4 1186 aaPredicted RBP11.85□□□□□ -0.51
CCM2-210ENST00000478169 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
CCM2-210ENST00000478169 DLL1O00548 723 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
CCM2-210ENST00000478169 TRIM27P14373 513 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
CCM2-210ENST00000478169 USP6NLQ92738 828 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 ZNF512BQ96KM6 892 aaPredicted RBP11.84□□□□□ -0.51
CCM2-210ENST00000478169 DNAJC18Q9H819 358 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 TXNRD2Q9NNW7 524 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 FLT1P17948 1338 aa11.84□□□□□ -0.51
CCM2-210ENST00000478169 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.51
CCM2-210ENST00000478169 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 ZKSCAN1P17029 563 aaPredicted RBP11.83□□□□□ -0.52
CCM2-210ENST00000478169 RGS2P41220 211 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
CCM2-210ENST00000478169 ERVK-9P63128 1117 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 ERVK-24P63145 666 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 JAG1P78504 1218 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 Q3C1V9 767 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
CCM2-210ENST00000478169 TDHQ8IZJ6 230 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 SNRKQ9NRH2 765 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 PALD1Q9ULE6 856 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 CUL9Q8IWT3 2517 aa11.83□□□□□ -0.52
CCM2-210ENST00000478169 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 GDF11O95390 407 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
CCM2-210ENST00000478169 COL6A1P12109 1028 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 SYN1P17600 705 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
CCM2-210ENST00000478169 POLA2Q14181 598 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 MORN1Q5T089 497 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 GPR142Q7Z601 462 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 ADGRA1Q86SQ6 560 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 PFASO15067 1338 aa11.82□□□□□ -0.52
CCM2-210ENST00000478169 PEX10O60683 326 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 LHX8Q68G74 356 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 C12orf42Q96LP6 360 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 APBA2Q99767 749 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 DBNDD2Q9BQY9 259 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
CCM2-210ENST00000478169 PORCNQ9H237 461 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
CCM2-210ENST00000478169 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 GLRX3O76003 335 aaKnown RBP11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP14P54578 494 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 CCNA1P78396 465 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
CCM2-210ENST00000478169 CCL14Q16627 93 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
CCM2-210ENST00000478169 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
CCM2-210ENST00000478169 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
CCM2-210ENST00000478169 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
CCM2-210ENST00000478169 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms