RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MCM2P49736 904 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 ANAPC15P60006 121 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 EIF4A1P60842 406 aaKnown RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 PSME1Q06323 249 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 VAC14Q08AM6 782 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 SPEM2Q0P670 501 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 AMOTQ4VCS5 1084 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 PLEKHO1Q53GL0 409 aaPredicted RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 AKAP4Q5JQC9 854 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 TMCO4Q5TGY1 634 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 EXOC6BQ9Y2D4 811 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 LRRFIP2Q9Y608 721 aaKnown RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 USP3Q9Y6I4 520 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 AFDNP55196 1824 aaKnown RBP5.99□□□□□ -1.45
SF3B6-202ENST00000478050 NPHP3Q7Z494 1330 aa5.99□□□□□ -1.45
SF3B6-202ENST00000478050 C5P01031 1676 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 PNMA6EA0A0J9YXQ4 647 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 TMEM229AB2RXF0 380 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 BACH1O14867 736 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 CYP2E1P05181 493 aaPredicted RBP5.98□□□□□ -1.45
SF3B6-202ENST00000478050 SSFA2P28290 1259 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 TEFQ10587 303 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 HSP90AB4PQ58FF6 505 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 ZNF530Q6P9A1 599 aaPredicted RBP5.98□□□□□ -1.45
SF3B6-202ENST00000478050 USHBP1Q8N6Y0 703 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 ADAMTS19Q8TE59 1207 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 PBXIP1Q96AQ6 731 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 IL17RAQ96F46 866 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 USP44Q9H0E7 712 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 ZNF232Q9UNY5 417 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 HDAC5Q9UQL6 1122 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 LAMB4A4D0S4 1761 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 COL18A1P39060 1754 aa5.98□□□□□ -1.45
SF3B6-202ENST00000478050 PKD1L3Q7Z443 1732 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 PLEKHG2Q9H7P9 1386 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 BAG4O95429 457 aaKnown RBP5.97□□□□□ -1.45
SF3B6-202ENST00000478050 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B6-202ENST00000478050 CHMLP26374 656 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 PDE4CQ08493 712 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 C1orf141Q5JVX7 400 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 NBPF6Q5VWK0 638 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 SHISA2Q6UWI4 295 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 C20orf204Q6ZNR8 217 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 RAB44Q7Z6P3 723 aaPredicted RBP5.97□□□□□ -1.45
SF3B6-202ENST00000478050 ARHGEF25Q86VW2 580 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 PLPP7Q8NBV4 271 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 DNAAF4Q8WXU2 420 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 KIF1BPQ96EK5 621 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 NBPF4Q96M43 638 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 MTFR1LQ9H019 292 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 GRPEL1Q9HAV7 217 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 TCHHQ07283 1943 aa5.97□□□□□ -1.45
SF3B6-202ENST00000478050 PARP4Q9UKK3 1724 aaKnown RBP5.96□□□□□ -1.45
SF3B6-202ENST00000478050 C1orf167Q5SNV9 1468 aa5.96□□□□□ -1.45
SF3B6-202ENST00000478050 PXDNQ92626 1479 aa5.96□□□□□ -1.45
SF3B6-202ENST00000478050 HEG1Q9ULI3 1381 aa5.96□□□□□ -1.45
SF3B6-202ENST00000478050 RNMTO43148 476 aaKnown RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 ALDH1L1O75891 902 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 TOMM70O94826 608 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 EIF2S2P20042 333 aaKnown RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 MTX1Q13505 466 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 KLHL40Q2TBA0 621 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 BEND3Q5T5X7 828 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 PPP1R42Q7Z4L9 355 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 CEP63Q96MT8 703 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 IGFLR1Q9H665 355 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 PHAXQ9H814 394 aaKnown RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 JPH1Q9HDC5 661 aaPredicted RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 DBF4Q9UBU7 674 aaPredicted RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 RNF112Q9ULX5 631 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 TTC41PQ6P2S7 1318 aa5.96□□□□□ -1.46
SF3B6-202ENST00000478050 USP42Q9H9J4 1324 aaKnown RBP5.96□□□□□ -1.46
SF3B6-202ENST00000478050 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 ADCY9O60503 1353 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 SURF6O75683 361 aaKnown RBP5.95□□□□□ -1.46
SF3B6-202ENST00000478050 GCP02774 474 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 YBX3P16989 372 aaKnown RBP eCLIP5.95□□□□□ -1.462e-11■■□□□ 13.3
SF3B6-202ENST00000478050 NOS2P35228 1153 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 CUL4AQ13619 759 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 TEAD4Q15561 434 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 PDE4DIPQ5VU43 2346 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 ERC1Q8IUD2 1116 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 CNTROBQ8N137 903 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 RHPN1Q8TCX5 695 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 ANKRD24Q8TF21 1146 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 RILPL2Q969X0 211 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 INTS4Q96HW7 963 aaKnown RBP5.95□□□□□ -1.46
SF3B6-202ENST00000478050 ORAI2Q96SN7 254 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
SF3B6-202ENST00000478050 SCHIP1Q9P0W5 487 aaPredicted RBP5.95□□□□□ -1.46
SF3B6-202ENST00000478050 GPC6Q9Y625 555 aaPredicted RBP5.95□□□□□ -1.46
SF3B6-202ENST00000478050 DDX49Q9Y6V7 483 aaKnown RBP5.95□□□□□ -1.46
SF3B6-202ENST00000478050 WDR90Q96KV7 1748 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms