RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 SAMM50Q9Y512 469 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 TRIM37O94972 964 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 SKOR2Q2VWA4 1001 aaPredicted RBP7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 CBX8Q9HC52 389 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 PICK1Q9NRD5 415 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 AKAP2Q9Y2D5 859 aa7.07□□□□□ -1.28
NCKAP1-204ENST00000477988 FAM155AB1AL88 458 aaPredicted RBP7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 H3BS24 57 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 HPXP02790 462 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 ERVFC1P60507 584 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 ZBTB37Q5TC79 503 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 THAP5Q7Z6K1 395 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 NECAB3Q96P71 396 aaPredicted RBP7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 SLAMF8Q9P0V8 285 aa7.06□□□□□ -1.28
NCKAP1-204ENST00000477988 LRIG2O94898 1065 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 SLITRK5O94991 958 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 BMP6P22004 513 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 MCOLN1Q9GZU1 580 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 CSADQ9Y600 493 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 CAPN6Q9Y6Q1 641 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
NCKAP1-204ENST00000477988 DNAJC25-GNG10A0A024R161 153 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 DCDC2CA8MYV0 355 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 TRIM13O60858 407 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 DLG4P78352 724 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 LRRC14Q15048 493 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 RALGPS1Q5JS13 557 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 PI16Q6UXB8 463 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 ARMCX6Q7L4S7 300 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 ZNF507Q8TCN5 953 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 CEP44Q9C0F1 390 aa7.04□□□□□ -1.28
NCKAP1-204ENST00000477988 SFRP5Q5T4F7 317 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 NXPE4Q6UWF7 544 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 MPRIPQ6WCQ1 1025 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 TXNDC2Q86VQ3 553 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 SP110Q9HB58 689 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 TMEM59LQ9UK28 342 aa7.03□□□□□ -1.28
NCKAP1-204ENST00000477988 MYOCOSA0A1B0GUC4 107 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 SEMA7AO75326 666 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 FGD1P98174 961 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 TCERG1LQ5VWI1 586 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 GRIN3AQ8TCU5 1115 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 UBE2FQ969M7 185 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 XYLT2Q9H1B5 865 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 PPM1HQ9ULR3 514 aa7.02□□□□□ -1.29
NCKAP1-204ENST00000477988 ENC1O14682 589 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 PEX10O60683 326 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 GSTT1P30711 240 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 CAP2P40123 477 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 ZNF746Q6NUN9 644 aaPredicted RBP7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 LLGL2Q6P1M3 1020 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 MFSD2AQ8NA29 543 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 ANKRD24Q8TF21 1146 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 SRCIN1Q9C0H9 1055 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 RNF32Q9H0A6 362 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 TMPRSS5Q9H3S3 457 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 TPX2Q9ULW0 747 aaKnown RBP7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 PCDHA4Q9UN74 947 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 CYP8B1Q9UNU6 501 aa7.01□□□□□ -1.29
NCKAP1-204ENST00000477988 ESR1P03372 595 aa7□□□□□ -1.29
NCKAP1-204ENST00000477988 HK2P52789 917 aa7□□□□□ -1.29
NCKAP1-204ENST00000477988 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
NCKAP1-204ENST00000477988 ELMO3Q96BJ8 720 aa7□□□□□ -1.29
NCKAP1-204ENST00000477988 COX4I2Q96KJ9 171 aa7□□□□□ -1.29
NCKAP1-204ENST00000477988 GCM1Q9NP62 436 aa7□□□□□ -1.29
NCKAP1-204ENST00000477988 CNOT6Q9ULM6 557 aaKnown RBP7□□□□□ -1.29
NCKAP1-204ENST00000477988 ADRB1P08588 477 aa6.99□□□□□ -1.29
NCKAP1-204ENST00000477988 ZNF385BQ569K4 471 aa6.99□□□□□ -1.29
NCKAP1-204ENST00000477988 TPTE2Q6XPS3 522 aa6.99□□□□□ -1.29
NCKAP1-204ENST00000477988 BORCS6Q96GS4 357 aa6.99□□□□□ -1.29
NCKAP1-204ENST00000477988 ZSWIM5Q9P217 1185 aa6.99□□□□□ -1.29
NCKAP1-204ENST00000477988 TRHRP34981 398 aaPredicted RBP6.98□□□□□ -1.29
NCKAP1-204ENST00000477988 TMC7Q7Z402 723 aa6.98□□□□□ -1.29
NCKAP1-204ENST00000477988 ADAMTS10Q9H324 1103 aa6.98□□□□□ -1.29
NCKAP1-204ENST00000477988 KCTD3Q9Y597 815 aa6.98□□□□□ -1.29
NCKAP1-204ENST00000477988 TEX51A0A1B0GUA7 166 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 PAGE1O75459 146 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 CELA3BP08861 270 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 SLBPQ14493 270 aaKnown RBP eCLIP6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 DSC3Q14574 896 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 TMEM151BQ8IW70 566 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 MIPEPQ99797 713 aa6.97□□□□□ -1.29
NCKAP1-204ENST00000477988 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 CYP7A1P22680 504 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 KIR3DL1P43629 444 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 HDXQ7Z353 690 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 WNT10AQ9GZT5 417 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms