RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 SPON2Q9BUD6 331 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 PRDM10Q9NQV6 1147 aa7.42□□□□□ -1.22
SMNDC1-205ENST00000477763 CST3P01034 146 aaPredicted RBP7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 CD97P48960 835 aa7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 NKG7Q16617 165 aa7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 MCATQ8IVS2 390 aaKnown RBP7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 TOP6BLQ8N6T0 577 aa7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 POLR3KQ9Y2Y1 108 aaPredicted RBP7.41□□□□□ -1.22
SMNDC1-205ENST00000477763 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 CYP26A1O43174 497 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 PLCG1P19174 1290 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 CRKP46108 304 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 RACK1P63244 317 aaKnown RBP7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 ACSF2Q96CM8 615 aaPredicted RBP7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 TMEM87BQ96K49 555 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 PCDHGB7Q9Y5F8 929 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
SMNDC1-205ENST00000477763 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 LEFTY1O75610 366 aa7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 ATE1O95260 518 aa7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 HTR3BO95264 441 aa7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 PRAMEF13Q5VWM6 474 aa7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 REXO1Q8N1G1 1221 aaKnown RBP7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 EAF1Q96JC9 268 aaPredicted RBP7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
SMNDC1-205ENST00000477763 IGF2BP3O00425 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 YARSP54577 528 aaKnown RBP7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 FAM214BQ7L5A3 538 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 TGIF2Q9GZN2 237 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 REV1Q9UBZ9 1251 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 GTF2IRD1Q9UHL9 959 aa7.38□□□□□ -1.23
SMNDC1-205ENST00000477763 GRIN3BO60391 1043 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 SLITRK5O94991 958 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 EOMESO95936 686 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 SPINK2P20155 84 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 MLECQ14165 292 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 SEZ6Q53EL9 994 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 DTX1Q86Y01 620 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 SLFN12Q8IYM2 578 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 NKD1Q969G9 470 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 SPATA32Q96LK8 384 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 CCSER2Q9H7U1 834 aa7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.37□□□□□ -1.23
SMNDC1-205ENST00000477763 MED26O95402 600 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 HOXA10P31260 410 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 SSTR4P31391 388 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 ZNF165P49910 485 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 ZC3H6P61129 1189 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 COX4I2Q96KJ9 171 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 MIPEPQ99797 713 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 MAPK8IP1Q9UQF2 711 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 PCDHB14Q9Y5E9 798 aa7.36□□□□□ -1.23
SMNDC1-205ENST00000477763 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 FAM13CQ8NE31 585 aa7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 CYB5D2Q8WUJ1 264 aa7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 PRDM5Q9NQX1 630 aaPredicted RBP7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 ZC3H7BQ9UGR2 993 aaKnown RBP7.35□□□□□ -1.23
SMNDC1-205ENST00000477763 PRNPP04156 253 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 OXCT1P55809 520 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 GNL2Q13823 731 aaKnown RBP7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 COL9A2Q14055 689 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 RASGRP4Q8TDF6 673 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 C8orf37Q96NL8 207 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 DPH2Q9BQC3 489 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 PCMTD2Q9NV79 361 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 GMIPQ9P107 970 aa7.34□□□□□ -1.23
SMNDC1-205ENST00000477763 CYP7A1P22680 504 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 MCM4P33991 863 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 ETV3P41162 512 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 GJA8P48165 433 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 CLCQ05315 142 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 PAK2Q13177 524 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 LRRFIP1Q32MZ4 808 aaKnown RBP7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
SMNDC1-205ENST00000477763 SLC22A31A6NKX4 558 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 MEIS3P2A8K0S8 358 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 UPK3BL1B0FP48 263 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 UPK3BL2E5RIL1 263 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 DNAJA2O60884 412 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 CEACAM5P06731 702 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 IMPDH2P12268 514 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 SFRP5Q5T4F7 317 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 GK5Q6ZS86 529 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 ARHGAP27Q6ZUM4 889 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms