RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 FANCBQ8NB91 859 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 SLC44A5Q8NCS7 719 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 ZNF622Q969S3 477 aaKnown RBP eCLIP14.2□□□□□ -0.141e-6■□□□□ 11.2
PRPF39-203ENST00000477626 RCOR1Q9UKL0 485 aa14.2□□□□□ -0.14
PRPF39-203ENST00000477626 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
PRPF39-203ENST00000477626 USP17L3A6NCW0 530 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 USP17L4A6NCW7 530 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 C21orf2O43822 256 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 BAG3O95817 575 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 USP17L1Q7RTZ2 530 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 SIAH1Q8IUQ4 282 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 ZBTB43O43298 467 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
PRPF39-203ENST00000477626 CDK8P49336 464 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF39-203ENST00000477626 TMTC3Q6ZXV5 915 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
PRPF39-203ENST00000477626 CD2APQ9Y5K6 639 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 A0A0G2JMZ2 1700 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 FAM237AA0A1B0GTK4 181 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 PLCG2P16885 1265 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 FAM173BQ6P4H8 233 aa14.19□□□□□ -0.14
PRPF39-203ENST00000477626 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 PRDM1O75626 825 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 WTAPQ15007 396 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 PTPAQ15257 358 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 MCM9Q9NXL9 1143 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 PALM3A6NDB9 673 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 RXRAP19793 462 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 MAPKAPK5Q8IW41 473 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 MINDY4BA8MYZ0 360 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 PRPF40AO75400 957 aaKnown RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 TRDNQ13061 729 aa14.18□□□□□ -0.14
PRPF39-203ENST00000477626 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
PRPF39-203ENST00000477626 PRPF3O43395 683 aaKnown RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 CYTH3O43739 400 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 TOB1P50616 345 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 GRM4Q14833 912 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 SUPT20HQ8NEM7 779 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 PHF20Q9BVI0 1012 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 GDPD2Q9HCC8 539 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 PLEKHA8P1O95397 391 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 VEGFAP15692 232 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 SNW1Q13573 536 aaKnown RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 ZSCAN23Q3MJ62 389 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 FAM47AQ5JRC9 791 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 RSBN1LQ6PCB5 846 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 RAB11FIP4Q86YS3 637 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 ENGASEQ8NFI3 743 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 PHKBQ93100 1093 aa14.17□□□□□ -0.14
PRPF39-203ENST00000477626 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-203ENST00000477626 JAG1P78504 1218 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 SLF2Q8IX21 1173 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 TEX11Q8IYF3 940 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 MYH7BA7E2Y1 1941 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 UBE2HP62256 183 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRPF39-203ENST00000477626 ZNF280AP59817 542 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-203ENST00000477626 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 SLC12A7Q9Y666 1083 aa14.16□□□□□ -0.14
PRPF39-203ENST00000477626 LCTP09848 1927 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 MMP1P03956 469 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 DDTLA6NHG4 134 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-203ENST00000477626 RASGRP2Q7LDG7 609 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 SSC5DA1L4H1 1573 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 DHX16O60231 1041 aaKnown RBP14.15□□□□□ -0.14
PRPF39-203ENST00000477626 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-203ENST00000477626 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-203ENST00000477626 MICU3Q86XE3 530 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-203ENST00000477626 TEKT1Q969V4 418 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 CHMP4CQ96CF2 233 aa14.15□□□□□ -0.14
PRPF39-203ENST00000477626 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 FZD9O00144 591 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 PSMD14O00487 310 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SLURP2P0DP57 97 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 USP28Q96RU2 1077 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 ORC3Q9UBD5 711 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-203ENST00000477626 GOLGA8AA7E2F4 631 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 EDIL3O43854 480 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SMARCA1P28370 1054 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SCNN1DP51172 638 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 TMEM47Q9BQJ4 181 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SMCHD1A6NHR9 2005 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms