RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SCAF8Q9UPN6 1271 aaKnown RBP9.08□□□□□ -0.96
BRCA1-214ENST00000477152 CSADQ9Y600 493 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 PTPRCP08575 1304 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 LAMB1P07942 1786 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 CLRN2A0PK11 232 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 WTIPA6NIX2 430 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-214ENST00000477152 PNMA1Q8ND90 353 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 TDRD7Q8NHU6 1098 aaKnown RBP9.08□□□□□ -0.96
BRCA1-214ENST00000477152 SUGT1Q9Y2Z0 365 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 ARAP2Q8WZ64 1704 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 GTF2A2P52657 109 aa9.07□□□□□ -0.96
BRCA1-214ENST00000477152 RASA3Q14644 834 aa9.07□□□□□ -0.96
BRCA1-214ENST00000477152 CCDC184Q52MB2 194 aa9.07□□□□□ -0.96
BRCA1-214ENST00000477152 METTL24Q5JXM2 366 aa9.07□□□□□ -0.96
BRCA1-214ENST00000477152 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
BRCA1-214ENST00000477152 PRMT6Q96LA8 375 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-214ENST00000477152 IFIT1P09914 478 aaKnown RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 KIF22Q14807 665 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 DCAF15Q66K64 600 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 CERS5Q8N5B7 392 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 TEKT1Q969V4 418 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 ZNF594Q96JF6 807 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 MRIQ9BWK5 157 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 TRIM17Q9Y577 477 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 CRKP46108 304 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 NBPF12Q5TAG4 269 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 DZIP1LQ8IYY4 767 aaKnown RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
BRCA1-214ENST00000477152 IRS2Q9Y4H2 1338 aa9.06□□□□□ -0.96
BRCA1-214ENST00000477152 UTYO14607 1347 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 E9PSI1 815 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 USP2O75604 605 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-214ENST00000477152 GYG1P46976 350 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 SP3Q02447 781 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 FAM84BQ96KN1 310 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-214ENST00000477152 EFCC1Q9HA90 598 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 ZCCHC17Q9NP64 241 aaKnown RBP9.05□□□□□ -0.96
BRCA1-214ENST00000477152 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
BRCA1-214ENST00000477152 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-214ENST00000477152 MYH13Q9UKX3 1938 aa9.05□□□□□ -0.96
BRCA1-214ENST00000477152 PDE8BO95263 885 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 SLC5A1P13866 664 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 FKBP1CQ5VVH2 108 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 FAM174AQ8TBP5 190 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 WDR66Q8TBY9 1149 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 BAP1Q92560 729 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 OPTNQ96CV9 577 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 SUCLG2Q96I99 432 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 TDRD3Q9H7E2 651 aaKnown RBP9.04□□□□□ -0.96
BRCA1-214ENST00000477152 RIPOR2Q9Y4F9 1068 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 GNRH1P01148 92 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 CETPP11597 493 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 SOX11P35716 441 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-214ENST00000477152 PUM3Q15397 648 aaKnown RBP9.04□□□□□ -0.96
BRCA1-214ENST00000477152 RABL6Q3YEC7 729 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-214ENST00000477152 EPHA10Q5JZY3 1008 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 PBXIP1Q96AQ6 731 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 JAG2Q9Y219 1238 aa9.04□□□□□ -0.96
BRCA1-214ENST00000477152 SNAP23O00161 211 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 PRMT2P55345 433 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-214ENST00000477152 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
BRCA1-214ENST00000477152 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 PCDHB9Q9Y5E1 797 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 CCL15-CCL14A0A0B4J2E2 113 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 MAGEB6P1A0A0J9YX57 407 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-214ENST00000477152 CRHR2Q13324 411 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 CCL15Q16663 113 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 ALDH1L2Q3SY69 923 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 HHIPL2Q6UWX4 724 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
BRCA1-214ENST00000477152 ZDHHC15Q96MV8 337 aa9.03□□□□□ -0.96
BRCA1-214ENST00000477152 IGF2BP3O00425 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
BRCA1-214ENST00000477152 NBPF7P0C2Y1 421 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-214ENST00000477152 HOXD10P28358 340 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 PTK2Q05397 1052 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 SNAPC2Q13487 334 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 LPIN2Q92539 896 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 FOXJ1Q92949 421 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
BRCA1-214ENST00000477152 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms