RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
PTPRN-213ENST00000476930 FMNL1O95466 1100 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-213ENST00000476930 GNRH1P01148 92 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 ASNSP08243 561 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 OSBPP22059 807 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 PLCD1P51178 756 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 PROCA1Q8NCQ7 364 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-213ENST00000476930 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 WDR18Q9BV38 432 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 AS3MTQ9HBK9 375 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 PLXNB2O15031 1838 aa13.53□□□□□ -0.24
PTPRN-213ENST00000476930 MYCP01106 439 aaPredicted RBP13.52□□□□□ -0.25
PTPRN-213ENST00000476930 ADD2P35612 726 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 RRP1P56182 461 aaKnown RBP13.52□□□□□ -0.25
PTPRN-213ENST00000476930 MTMR2Q13614 643 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
PTPRN-213ENST00000476930 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 CEP290O15078 2479 aa13.52□□□□□ -0.25
PTPRN-213ENST00000476930 MYPNQ86TC9 1320 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 GH2P01242 217 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 BACE1P56817 501 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 ANKRD13CQ8N6S4 541 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
PTPRN-213ENST00000476930 EHD4Q9H223 541 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
PTPRN-213ENST00000476930 PRKAB2O43741 272 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 MBD4O95243 580 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-213ENST00000476930 CYP2D6P10635 497 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 EN2P19622 333 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-213ENST00000476930 HOXD10P28358 340 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 SHMT1P34896 483 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 PRMT2P55345 433 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 FCGRTP55899 365 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 PRKCZQ05513 592 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-213ENST00000476930 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-213ENST00000476930 ECHDC1Q9NTX5 307 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
PTPRN-213ENST00000476930 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 GABPAQ06546 454 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
PTPRN-213ENST00000476930 RAET1EQ8TD07 263 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPRN-213ENST00000476930 TMOD4Q9NZQ9 345 aa13.49□□□□□ -0.25
PTPRN-213ENST00000476930 C19orf81C9J6K1 198 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 SMIM22K7EJ46 135 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 PEX10O60683 326 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 GUCY1A2P33402 732 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPRN-213ENST00000476930 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
PTPRN-213ENST00000476930 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 MTFR1Q15390 333 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
PTPRN-213ENST00000476930 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 RLFQ13129 1914 aa13.48□□□□□ -0.25
PTPRN-213ENST00000476930 CYP2D7A0A087X1C5 515 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 TNPO2O14787 897 aaKnown RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 GRK4P32298 578 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 FLT3LGP49771 235 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 SLC44A5Q8NCS7 719 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
PTPRN-213ENST00000476930 PARP14Q460N5 1801 aa13.47□□□□□ -0.25
PTPRN-213ENST00000476930 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
PTPRN-213ENST00000476930 SEPT2Q15019 361 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 TXNRD2Q9NNW7 524 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 CABP5Q9NP86 173 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
PTPRN-213ENST00000476930 ZNFX1Q9P2E3 1918 aaKnown RBP13.46□□□□□ -0.25
PTPRN-213ENST00000476930 MYH4Q9Y623 1939 aa13.45□□□□□ -0.26
PTPRN-213ENST00000476930 ADCY3O60266 1144 aa13.45□□□□□ -0.26
PTPRN-213ENST00000476930 ELNP15502 786 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms