RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RXRAP19793 462 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 MMP14P50281 582 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 MICU3Q86XE3 530 aa33.8■■■■□ 3
VEGFA-211ENST00000476772 LLPHQ9BRT6 129 aaKnown RBP33.8■■■■□ 3
VEGFA-211ENST00000476772 TSPY3P0CV98 308 aa33.79■■■■□ 3
VEGFA-211ENST00000476772 TSPY8P0CW00 308 aa33.79■■■■□ 3
VEGFA-211ENST00000476772 NSUN7Q8NE18 718 aaKnown RBP33.79■■■■□ 3
VEGFA-211ENST00000476772 MYH8P13535 1937 aa33.78■■■■□ 3
VEGFA-211ENST00000476772 METAP2P50579 478 aaKnown RBP eCLIP33.78■■■■□ 37e-12■□□□□ 8.9
VEGFA-211ENST00000476772 IFIT1BQ5T764 474 aaKnown RBP33.78■■■■□ 3
VEGFA-211ENST00000476772 ZSCAN29Q8IWY8 852 aaPredicted RBP33.78■■■■□ 3
VEGFA-211ENST00000476772 MICALL2Q8IY33 904 aa33.78■■■■□ 3
VEGFA-211ENST00000476772 EHD4Q9H223 541 aa33.78■■■■□ 3
VEGFA-211ENST00000476772 TCP10L2B9ZVM9 353 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 WNT10BO00744 389 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 SYNE3Q6ZMZ3 975 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 SMARCC2Q8TAQ2 1214 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 CHMP4CQ96CF2 233 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 SWAP70Q9UH65 585 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 UTRNP46939 3433 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 COL2A1P02458 1487 aaPredicted RBP33.77■■■■□ 3
VEGFA-211ENST00000476772 NBPF9Q3BBW0 867 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 IL17RBQ9NRM6 502 aa33.77■■■■□ 3
VEGFA-211ENST00000476772 CNOT7Q9UIV1 285 aaKnown RBP33.77■■■■□ 3
VEGFA-211ENST00000476772 ATRNL1Q5VV63 1379 aa33.76■■■□□ 2.99
VEGFA-211ENST00000476772 CCDC144CPQ8IYA2 1237 aa33.76■■■□□ 2.99
VEGFA-211ENST00000476772 ZNF654Q8IZM8 581 aa33.76■■■□□ 2.99
VEGFA-211ENST00000476772 ZDHHC9Q9Y397 364 aa33.76■■■□□ 2.99
VEGFA-211ENST00000476772 PTPDC1A2A3K4 754 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 GOLGA8AA7E2F4 631 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 MYO1BO43795 1136 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 EGFRP00533 1210 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 VEZTQ9HBM0 779 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 RNF181Q9P0P0 153 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 PI4KBQ9UBF8 816 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 NID2Q14112 1375 aa33.75■■■□□ 2.99
VEGFA-211ENST00000476772 DHX16O60231 1041 aaKnown RBP33.74■■■□□ 2.99
VEGFA-211ENST00000476772 TNPO1Q92973 898 aaKnown RBP33.74■■■□□ 2.99
VEGFA-211ENST00000476772 TCP11L1Q9NUJ3 509 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 SLURP2P0DP57 97 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 SHMT1P34896 483 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 RBM26Q5T8P6 1007 aaKnown RBP33.74■■■□□ 2.99
VEGFA-211ENST00000476772 RCSD1Q6JBY9 416 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 NEDD1Q8NHV4 660 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 DDX11Q96FC9 970 aa33.74■■■□□ 2.99
VEGFA-211ENST00000476772 CNTNAP1P78357 1384 aa33.73■■■□□ 2.99
VEGFA-211ENST00000476772 SYT1P21579 422 aa33.73■■■□□ 2.99
VEGFA-211ENST00000476772 CDC27P30260 824 aa33.73■■■□□ 2.99
VEGFA-211ENST00000476772 CRACR2BQ8N4Y2 399 aaPredicted RBP33.73■■■□□ 2.99
VEGFA-211ENST00000476772 DNAJC18Q9H819 358 aa33.73■■■□□ 2.99
VEGFA-211ENST00000476772 SRCAPQ6ZRS2 3230 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 BRD1O95696 1058 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 ADD1P35611 737 aaKnown RBP33.72■■■□□ 2.99
VEGFA-211ENST00000476772 FKBP1CQ5VVH2 108 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 SAMD7Q7Z3H4 446 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 GPC2Q8N158 579 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 FAM151AQ8WW52 585 aa33.72■■■□□ 2.99
VEGFA-211ENST00000476772 FAM217BQ9NTX9 383 aaPredicted RBP33.72■■■□□ 2.99
VEGFA-211ENST00000476772 CPLX1O14810 134 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 RCAN1P53805 252 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 CCDC178Q5BJE1 867 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 PPFIA3O75145 1194 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 HMGN5P82970 282 aaKnown RBP33.71■■■□□ 2.99
VEGFA-211ENST00000476772 TBC1D10BQ4KMP7 808 aaPredicted RBP33.71■■■□□ 2.99
VEGFA-211ENST00000476772 CATIPQ7Z7H3 387 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 DGKHQ86XP1 1220 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 NUP133Q8WUM0 1156 aa33.71■■■□□ 2.99
VEGFA-211ENST00000476772 PLIN4Q96Q06 1357 aa33.7■■■□□ 2.99
VEGFA-211ENST00000476772 FAM196BA6NMK8 535 aa33.7■■■□□ 2.99
VEGFA-211ENST00000476772 STX6O43752 255 aa33.7■■■□□ 2.99
VEGFA-211ENST00000476772 AKR1B1P15121 316 aa33.7■■■□□ 2.99
VEGFA-211ENST00000476772 FOXD4L5Q5VV16 416 aaPredicted RBP33.7■■■□□ 2.99
VEGFA-211ENST00000476772 FOXD4L4Q8WXT5 416 aaPredicted RBP33.7■■■□□ 2.99
VEGFA-211ENST00000476772 ANKS1AQ92625 1134 aa33.7■■■□□ 2.99
VEGFA-211ENST00000476772 RTN1Q16799 776 aa33.69■■■□□ 2.98
VEGFA-211ENST00000476772 FOXP4Q8IVH2 680 aaPredicted RBP33.69■■■□□ 2.98
VEGFA-211ENST00000476772 CSRNP1Q96S65 589 aa33.69■■■□□ 2.98
VEGFA-211ENST00000476772 C9orf131Q5VYM1 1079 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 LARP1BQ659C4 914 aaKnown RBP33.68■■■□□ 2.98
VEGFA-211ENST00000476772 WDR33Q9C0J8 1336 aaKnown RBP33.68■■■□□ 2.98
VEGFA-211ENST00000476772 GPR162Q16538 588 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 KIF4BQ2VIQ3 1234 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 FAM83AQ86UY5 434 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 METTL16Q86W50 562 aaKnown RBP33.68■■■□□ 2.98
VEGFA-211ENST00000476772 FAM184AQ8NB25 1140 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.68■■■□□ 2.98
VEGFA-211ENST00000476772 TRIM34Q9BYJ4 488 aa33.68■■■□□ 2.98
VEGFA-211ENST00000476772 H7C1D1 291 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 DDAH1O94760 285 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 PDCP20941 246 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 TROAPQ12815 778 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 FANCBQ8NB91 859 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 GPRC5DQ9NZD1 345 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 TAOK2Q9UL54 1235 aa33.67■■■□□ 2.98
VEGFA-211ENST00000476772 NFKBIBQ15653 356 aa33.66■■■□□ 2.98
VEGFA-211ENST00000476772 NTRK3Q16288 839 aa33.66■■■□□ 2.98
VEGFA-211ENST00000476772 CEP95Q96GE4 821 aa33.66■■■□□ 2.98
VEGFA-211ENST00000476772 KAT14Q9H8E8 782 aa33.66■■■□□ 2.98
VEGFA-211ENST00000476772 STX8Q9UNK0 236 aa33.66■■■□□ 2.98
VEGFA-211ENST00000476772 FDPSP14324 419 aaKnown RBP33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms