RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 ABCC4O15439 1325 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 KDM2BQ8NHM5 1336 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
CHD6-207ENST00000476641 GLTPD2A6NH11 291 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 ELOA3DA6NLF2 546 aaPredicted RBP10.19□□□□□ -0.78
CHD6-207ENST00000476641 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 HOXA10P31260 410 aaPredicted RBP10.19□□□□□ -0.78
CHD6-207ENST00000476641 FKBP4Q02790 459 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHD6-207ENST00000476641 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
CHD6-207ENST00000476641 MTFR1Q15390 333 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 RSPO4Q2I0M5 234 aaPredicted RBP10.19□□□□□ -0.78
CHD6-207ENST00000476641 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 ELOA3BQ3SY89 546 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 SLC10A5Q5PT55 438 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 G2E3Q7L622 706 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 ELOA3Q8NG57 546 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 FAM89AQ96GI7 184 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 HYPKQ9NX55 129 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 FER1L6Q2WGJ9 1857 aa10.19□□□□□ -0.78
CHD6-207ENST00000476641 COL4A1P02462 1669 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 RIC1Q4ADV7 1423 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 SH3TC1Q8TE82 1336 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 SCO2A0A1W2PP80 73 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 SPDYE3A6NKU9 549 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 EFSO43281 561 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 TOMM70O94826 608 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 HSPA6P17066 643 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 ALAS2P22557 587 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 BRPF1P55201 1214 aaPredicted RBP10.18□□□□□ -0.78
CHD6-207ENST00000476641 CCDC27Q2M243 656 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 HSP90AB3PQ58FF7 597 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 PRRT3Q5FWE3 981 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 RBM17Q96I25 401 aaKnown RBP10.18□□□□□ -0.78
CHD6-207ENST00000476641 MYD88Q99836 296 aa10.18□□□□□ -0.78
CHD6-207ENST00000476641 TIAM2Q8IVF5 1701 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 ALDH1B1P30837 517 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 SOGA3Q5TF21 947 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 SYT9Q86SS6 491 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 CRAMP1Q96RY5 1269 aa10.17□□□□□ -0.78
CHD6-207ENST00000476641 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
CHD6-207ENST00000476641 IARSP41252 1262 aaKnown RBP10.16□□□□□ -0.78
CHD6-207ENST00000476641 TWISTNBQ3B726 338 aaPredicted RBP10.16□□□□□ -0.78
CHD6-207ENST00000476641 CCDC30Q5VVM6 783 aa10.16□□□□□ -0.78
CHD6-207ENST00000476641 C16orf71Q8IYS4 520 aaPredicted RBP10.16□□□□□ -0.78
CHD6-207ENST00000476641 RTKN2Q8IZC4 609 aa10.16□□□□□ -0.78
CHD6-207ENST00000476641 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
CHD6-207ENST00000476641 ARFGEF2Q9Y6D5 1785 aa10.16□□□□□ -0.78
CHD6-207ENST00000476641 CCDC88AQ3V6T2 1871 aa10.15□□□□□ -0.78
CHD6-207ENST00000476641 IRS4O14654 1257 aaPredicted RBP10.15□□□□□ -0.78
CHD6-207ENST00000476641 VEGFAP15692 232 aaPredicted RBP10.15□□□□□ -0.78
CHD6-207ENST00000476641 EXOSC9Q06265 439 aaKnown RBP10.15□□□□□ -0.78
CHD6-207ENST00000476641 NKAPLQ5M9Q1 402 aa10.15□□□□□ -0.78
CHD6-207ENST00000476641 CELF1Q92879 486 aaKnown RBP10.15□□□□□ -0.78
CHD6-207ENST00000476641 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.78
CHD6-207ENST00000476641 IL16Q14005 1332 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 PI4KAP2A4QPH2 592 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 IGKV5-2P06315 115 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 TXLNAP40222 546 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 GRAPQ13588 217 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 AOC3Q16853 763 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
CHD6-207ENST00000476641 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
CHD6-207ENST00000476641 PI4KAP1Q8N8J0 262 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
CHD6-207ENST00000476641 GPR101Q96P66 508 aaPredicted RBP10.14□□□□□ -0.79
CHD6-207ENST00000476641 PSMD1Q99460 953 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 MDFIQ99750 246 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
CHD6-207ENST00000476641 SEC31BQ9NQW1 1179 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 ATP6V0A2Q9Y487 856 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 ANKRD36CQ5JPF3 1778 aa10.14□□□□□ -0.79
CHD6-207ENST00000476641 RNF123Q5XPI4 1314 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 FZD9O00144 591 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 VAMP4O75379 141 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
CHD6-207ENST00000476641 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
CHD6-207ENST00000476641 DDX46Q7L014 1031 aaKnown RBP10.13□□□□□ -0.79
CHD6-207ENST00000476641 WDR63Q8IWG1 891 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 LARGE2Q8N3Y3 721 aa10.13□□□□□ -0.79
CHD6-207ENST00000476641 M0R082 166 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 PPIP5K2O43314 1243 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 DYRK3O43781 588 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 SF3B3Q15393 1217 aaKnown RBP10.12□□□□□ -0.79
CHD6-207ENST00000476641 KSR2Q6VAB6 950 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 LRRC69Q6ZNQ3 347 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 ZBTB38Q8NAP3 1195 aaPredicted RBP10.12□□□□□ -0.79
CHD6-207ENST00000476641 SMC1BQ8NDV3 1235 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 ZNF417Q8TAU3 575 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 ZNF587Q96SQ5 575 aaPredicted RBP10.12□□□□□ -0.79
CHD6-207ENST00000476641 STK31Q9BXU1 1019 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 CWC25Q9NXE8 425 aaPredicted RBP10.12□□□□□ -0.79
CHD6-207ENST00000476641 PCDHGA11Q9Y5H2 935 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 PCNTO95613 3336 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 TAF1P21675 1872 aa10.12□□□□□ -0.79
CHD6-207ENST00000476641 LAMB2P55268 1798 aa10.11□□□□□ -0.79
CHD6-207ENST00000476641 ZNF521Q96K83 1311 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms