RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SCARF1Q14162 830 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 CCDC57Q2TAC2 916 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 TMEM164Q5U3C3 297 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 MIS18BP1Q6P0N0 1132 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 GBP7Q8N8V2 638 aaPredicted RBP4.7□□□□□ -1.66
CD55-208ENST00000476590 TRIM58Q8NG06 486 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 FAM200AQ8TCP9 573 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 SLC35B4Q969S0 331 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 MPHOSPH6Q99547 160 aaKnown RBP4.7□□□□□ -1.66
CD55-208ENST00000476590 BEGAINQ9BUH8 593 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 KLC4Q9NSK0 619 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 MAP3K20Q9NYL2 800 aaKnown RBP4.7□□□□□ -1.66
CD55-208ENST00000476590 DDX20Q9UHI6 824 aaKnown RBP4.7□□□□□ -1.66
CD55-208ENST00000476590 CORO1CQ9ULV4 474 aaPredicted RBP4.7□□□□□ -1.66
CD55-208ENST00000476590 ZNF510Q9Y2H8 683 aa4.7□□□□□ -1.66
CD55-208ENST00000476590 SETD1BQ9UPS6 1966 aaKnown RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 CFAP69A5D8W1 941 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 MAP2K7O14733 419 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 LIN7AO14910 233 aaPredicted RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 AP5Z1O43299 807 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 DESP17661 470 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 ATP2B2Q01814 1243 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 NSUN2Q08J23 767 aaKnown RBP eCLIP4.69□□□□□ -1.66
CD55-208ENST00000476590 APOBRQ0VD83 1088 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 LRMPQ12912 555 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 MYBPC3Q14896 1274 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 SLMAPQ14BN4 828 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 PLCB4Q15147 1175 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 CLPPQ16740 277 aaPredicted RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 SPATS2Q86XZ4 545 aaKnown RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 CNNM3Q8NE01 707 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 FAM71BQ8TC56 605 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 CHMP7Q8WUX9 453 aaPredicted RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 RSPH1Q8WYR4 309 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 BRD8Q9H0E9 1235 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 PAPOLBQ9NRJ5 636 aaKnown RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 UBAP1Q9NZ09 502 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 ZMIZ1Q9ULJ6 1067 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 EVC2Q86UK5 1308 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 MAP3K5Q99683 1374 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 EPRSP07814 1512 aaKnown RBP4.69□□□□□ -1.66
CD55-208ENST00000476590 CLASP1Q7Z460 1538 aa4.69□□□□□ -1.66
CD55-208ENST00000476590 TMEM221A6NGB7 291 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 NBPF26B4DH59 902 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 ZBTB24O43167 697 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 SMNDC1O75940 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
CD55-208ENST00000476590 ZFXP17010 805 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 TRIM21P19474 475 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 MX1P20591 662 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 SMTNP53814 917 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 HDAC4P56524 1084 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CUL4BQ13620 913 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 DHX8Q14562 1220 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 SNCBQ16143 134 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 ENOX2Q16206 610 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 KIF4BQ2VIQ3 1234 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CCDC38Q502W7 563 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 FAAH2Q6GMR7 532 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 DZIP1Q86YF9 867 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 APLFQ8IW19 511 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 RAVER1Q8IY67 606 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 DRC7Q8IY82 874 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 GALNT15Q8N3T1 639 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 UHMK1Q8TAS1 419 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 NACC2Q96BF6 587 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 PHOX2BQ99453 314 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CORO1BQ9BR76 489 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CRISPLD2Q9H0B8 497 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 SLC39A2Q9NP94 309 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 EXOC1Q9NV70 894 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 SWAP70Q9UH65 585 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 ITGB1BP2Q9UKP3 347 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 ZNF608Q9ULD9 1512 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.68□□□□□ -1.66
CD55-208ENST00000476590 NAIPQ13075 1403 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 MYO1FO00160 1098 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 EIF3FO00303 357 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 CYP27B1O15528 508 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 TADA3O75528 432 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 KIAA0754O94854 1291 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 MBD4O95243 580 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 MYCLP1P12525 358 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 SMARCA1P28370 1054 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 ARHGAP25P42331 645 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 PSMD7P51665 324 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 PTK7Q13308 1070 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 DYNC1I2Q13409 638 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 DCTN1Q14203 1278 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 BRD3Q15059 726 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 FXNQ16595 210 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 TBC1D10BQ4KMP7 808 aaPredicted RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 PACS1Q6VY07 963 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CEP57Q86XR8 500 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 PEX5LQ8IYB4 626 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 TRMT2AQ8IZ69 625 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 TTC30BQ8N4P2 665 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 SPIRE2Q8WWL2 714 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 JDP2Q8WYK2 163 aa4.68□□□□□ -1.66
CD55-208ENST00000476590 CCDC47Q96A33 483 aaKnown RBP4.68□□□□□ -1.66
CD55-208ENST00000476590 MRGPRX2Q96LB1 330 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms