RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 GDF11O95390 407 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 APPP05067 770 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SHMT1P34896 483 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SHROOM1Q2M3G4 852 aaPredicted RBP25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 MCMDC2Q4G0Z9 681 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 AMOTL1Q8IY63 956 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 DYNLL2Q96FJ2 89 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SAGE1Q9NXZ1 904 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 AFG3L2Q9Y4W6 797 aa25.14■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SIPA1L1O43166 1804 aa25.14■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CXCL11O14625 94 aa25.13■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CETPP11597 493 aa25.13■■□□□ 1.61
MAP1LC3A-204ENST00000476428 SBK1Q52WX2 424 aa25.13■■□□□ 1.61
MAP1LC3A-204ENST00000476428 IFNL3Q8IZI9 196 aa25.13■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CERKLQ49MI3 558 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ERICH6BQ5W0A0 696 aa25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 SKAP1Q86WV1 359 aa25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 SLC44A5Q8NCS7 719 aa25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 GINM1Q9NU53 330 aa25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ARPP21Q9UBL0 812 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3A-204ENST00000476428 USP17L5A8MUK1 530 aa25.11■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ASNSP08243 561 aa25.11■■□□□ 1.61
MAP1LC3A-204ENST00000476428 PCDH10Q9P2E7 1040 aa25.11■■□□□ 1.61
MAP1LC3A-204ENST00000476428 MYH1P12882 1939 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 FOXP2O15409 715 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ALDH1A1P00352 501 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 TDO2P48775 406 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 VPS53Q5VIR6 699 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 OTUD7BQ6GQQ9 843 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 NACAP1Q9BZK3 213 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 SWAP70Q9UH65 585 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 TAOK2Q9UL54 1235 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ZBTB21Q9ULJ3 1066 aa25.1■■□□□ 1.61
MAP1LC3A-204ENST00000476428 DDX60LQ5H9U9 1706 aaKnown RBP25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 TRIM75PA6NK02 468 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 MINDY4BA8MYZ0 360 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 HIP1O00291 1037 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 TBC1D8O95759 1140 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 GH2P01242 217 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CDK8P49336 464 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 SPP2Q13103 211 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 MOGSQ13724 837 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ZNF589Q86UQ0 364 aaPredicted RBP25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 FAM43AQ8N2R8 423 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 DIAPH3Q9NSV4 1193 aa25.09■■□□□ 1.61
MAP1LC3A-204ENST00000476428 BTBD19C9JJ37 291 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ABCB5Q2M3G0 1257 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CWC27Q6UX04 472 aaKnown RBP25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 C16orf86Q6ZW13 317 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 ZNF280CQ8ND82 737 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 TBC1D2Q9BYX2 928 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 MCOLN1Q9GZU1 580 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 R3HDMLQ9H3Y0 253 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 PPP4R2Q9NY27 417 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 NAV1Q8NEY1 1877 aa25.08■■□□□ 1.61
MAP1LC3A-204ENST00000476428 CASP8AP2Q9UKL3 1982 aa25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 A0A0G2JLL6 359 aaPredicted RBP25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 PRRT2Q7Z6L0 340 aaPredicted RBP25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 WDR18Q9BV38 432 aa25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 NAPBQ9H115 298 aa25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 AS3MTQ9HBK9 375 aa25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CABP5Q9NP86 173 aa25.07■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CFHR5Q9BXR6 569 aa25.06■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CCDC171Q6TFL3 1326 aa25.06■■□□□ 1.6
MAP1LC3A-204ENST00000476428 GUCY1A2P33402 732 aa25.05■■□□□ 1.6
MAP1LC3A-204ENST00000476428 ALX1Q15699 326 aa25.05■■□□□ 1.6
MAP1LC3A-204ENST00000476428 GPAT2Q6NUI2 795 aa25.05■■□□□ 1.6
MAP1LC3A-204ENST00000476428 FASTKD5Q7L8L6 764 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3A-204ENST00000476428 STK11IPQ8N1F8 1099 aa25.05■■□□□ 1.6
MAP1LC3A-204ENST00000476428 HSPD1P10809 573 aaKnown RBP25.04■■□□□ 1.6
MAP1LC3A-204ENST00000476428 RAB3GAP1Q15042 981 aa25.04■■□□□ 1.6
MAP1LC3A-204ENST00000476428 ANKRD23Q86SG2 305 aa25.04■■□□□ 1.6
MAP1LC3A-204ENST00000476428 DOCK1Q14185 1865 aa25.04■■□□□ 1.6
MAP1LC3A-204ENST00000476428 MPHOSPH10O00566 681 aaKnown RBP25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 AKR1B1P15121 316 aa25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 MFAP1P55081 439 aaKnown RBP25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CRHR2Q13324 411 aa25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 SEPT2Q15019 361 aa25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 GADL1Q6ZQY3 521 aa25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CCDC17Q96LX7 622 aa25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 ZCCHC17Q9NP64 241 aaKnown RBP25.03■■□□□ 1.6
MAP1LC3A-204ENST00000476428 FGAP02671 866 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 CHMLP26374 656 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 BACE1P56817 501 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 PPARAQ07869 468 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 DGKZQ13574 1117 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 TAF1CQ15572 869 aaPredicted RBP25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 SH3D19Q5HYK7 790 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 ROBO3Q96MS0 1386 aa25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 TNRC18O15417 2968 aaPredicted RBP25.02■■□□□ 1.6
MAP1LC3A-204ENST00000476428 GPR25O00155 361 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 PDHXO00330 501 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 HMGCS2P54868 508 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 MTMR2Q13614 643 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 TMEM179Q6ZVK1 233 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 MKNK2Q9HBH9 465 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 ZFYVE28Q9HCC9 887 aa25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 BAZ2AQ9UIF9 1905 aaKnown RBP25.01■■□□□ 1.59
MAP1LC3A-204ENST00000476428 USP17L10C9JJH3 530 aa25■■□□□ 1.59
MAP1LC3A-204ENST00000476428 RASA1P20936 1047 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms