RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 JAKMIP3Q5VZ66 844 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 GPATCH11Q8N954 259 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 NLGN2Q8NFZ4 835 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KAZALD1Q96I82 304 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 EPSTI1Q96J88 318 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KANSL2Q9H9L4 492 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 SUGCTQ9HAC7 445 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 TCHHQ07283 1943 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 RANBP2P49792 3224 aaKnown RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 PDE6BP35913 854 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 PPP2R3AQ06190 1150 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 PLS1Q14651 629 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KRBA2Q6ZNG9 492 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 CDK5RAP3Q96JB5 506 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 RUFY1Q96T51 708 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 DBNDD1Q9H9R9 158 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KIAA1468Q9P260 1216 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 FZD1Q9UP38 647 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 NRKQ7Z2Y5 1582 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 SOWAHDA6NJG2 315 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 KIF5CO60282 957 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 SERPINB2P05120 415 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 XBP1P17861 261 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 EPS15P42566 896 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 DYNLL1P63167 89 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 KMT5BQ4FZB7 885 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 DYMQ7RTS9 669 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 TXNRD3Q86VQ6 643 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 NLRP10Q86W26 655 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 ACRBPQ8NEB7 543 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 OXER1Q8TDS5 423 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 TRIM47Q96LD4 638 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CDC5LQ99459 802 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 BAG1Q99933 345 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 KIF20BQ96Q89 1820 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CAPN2P17655 700 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 TRIM21P19474 475 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CXCR5P32302 372 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CACNB3P54284 484 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CACNB1Q02641 598 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 DDR1Q08345 913 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 RESTQ13127 1097 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 GPS2Q13227 327 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 AKNAD1Q5T1N1 836 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 TCERG1LQ5VWI1 586 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 PRAMEF18Q5VWM3 479 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 LEKR1Q6ZMV7 388 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 PROCA1Q8NCQ7 364 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CCDC191Q8NCU4 936 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CCDC113Q9H0I3 377 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 MAGEC2Q9UBF1 373 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 ZEB2O60315 1214 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 PRR29P0C7W0 189 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 MTIF2P46199 727 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 IFIT1BQ5T764 474 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 CCDC181Q5TID7 509 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 DZIP1Q86YF9 867 aaKnown RBP5.67□□□□□ -1.5
CCDC39-204ENST00000476379 IGSF22Q8N9C0 903 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 MCM9Q9NXL9 1143 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 PKD2L1Q9P0L9 805 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
CCDC39-204ENST00000476379 NWD1Q149M9 1564 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CARMIL3Q8ND23 1372 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 SRGAP2O75044 1071 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 WDHD1O75717 1129 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 OAS2P29728 719 aaKnown RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 MYL5Q02045 173 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 UBXN1Q04323 297 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 PRPF4BQ13523 1007 aaKnown RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 POLA2Q14181 598 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CTCFLQ8NI51 663 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 KCNG4Q8TDN1 519 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 PPP1R13BQ96KQ4 1090 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 AKAP2Q9Y2D5 859 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 A0A0U1RQJ8 604 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CCDC66A2RUB6 948 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CDKL5O76039 1030 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 HMGB1P09429 215 aaKnown RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 ATP5JP18859 108 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CDC27P30260 824 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 BARGINQ6ZT62 677 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 ZNF397Q8NF99 534 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 ATRIPQ8WXE1 791 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 RPGRQ92834 1020 aaKnown RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CRACR2AQ9BSW2 395 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
CCDC39-204ENST00000476379 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 DISP2A7MBM2 1401 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 GYS1P13807 737 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 SCNN1DP51172 638 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 TCIRG1Q13488 830 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 LETM2Q2VYF4 491 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 CYB5R4Q7L1T6 521 aa5.66□□□□□ -1.5
CCDC39-204ENST00000476379 TBC1D10CQ8IV04 446 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms