RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FANCGO15287 622 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 TMPRSS2O15393 492 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 TPD52L2O43399 206 aaKnown RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 ACRP10323 421 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 RAG1P15918 1043 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 RING1Q06587 406 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 NCAPHQ15003 741 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 ZYXQ15942 572 aaKnown RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 PLEKHG6Q3KR16 790 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 GORABQ5T7V8 394 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 ZBTB37Q5TC79 503 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 CDCP2Q5VXM1 449 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 INTS3Q68E01 1043 aaKnown RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 VHLLQ6RSH7 139 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 FMR1NBQ8N0W7 255 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 FAM13CQ8NE31 585 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 NEDD1Q8NHV4 660 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 ACSF2Q96CM8 615 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 SLC9A7Q96T83 725 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 PHAXQ9H814 394 aaKnown RBP5.72□□□□□ -1.49
VPS13D-207ENST00000476169 PPP1R9AQ9ULJ8 1098 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 PRKAB1Q9Y478 270 aa5.72□□□□□ -1.49
VPS13D-207ENST00000476169 A0A0A0MRY4 1105 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 UPK3BL1B0FP48 263 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 UPK3BL2E5RIL1 263 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 DLL1O00548 723 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 TNFRSF10CO14798 259 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 WISP1O95388 367 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 GMPRP36959 345 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 YARSP54577 528 aaKnown RBP5.71□□□□□ -1.5
VPS13D-207ENST00000476169 NUTM2GQ5VZR2 741 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 ACAD11Q709F0 780 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 ZNF507Q8TCN5 953 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 WHAMMQ8TF30 809 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 APPBP2Q92624 585 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 TMPRSS13Q9BYE2 586 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 ATXN3LQ9H3M9 355 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 CRIM1Q9NZV1 1036 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 TJP2Q9UDY2 1190 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 PFDN2Q9UHV9 154 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 RIPOR2Q9Y4F9 1068 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 LTBP3Q9NS15 1303 aa5.71□□□□□ -1.5
VPS13D-207ENST00000476169 ESYT3A0FGR9 886 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 HOXB4P17483 251 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 POLR2BP30876 1174 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 SSRP1Q08945 709 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 PLEKHG4Q58EX7 1191 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 MRM1Q6IN84 353 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 EEPD1Q7L9B9 569 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 HOMER1Q86YM7 354 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 HID1Q8IV36 788 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 PRPF38AQ8NAV1 312 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 RNF214Q8ND24 703 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 ST13P5Q8NFI4 369 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 CCDC136Q96JN2 1154 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 TMEM87BQ96K49 555 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 FANCD2OSQ96PS1 177 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 RNF208Q9H0X6 261 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 CYP4F12Q9HCS2 524 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 DISC1Q9NRI5 854 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 ENAMQ9NRM1 1142 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 SLC52A1Q9NWF4 448 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
VPS13D-207ENST00000476169 PCDHB10Q9UN67 800 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 KDM2BQ8NHM5 1336 aa5.7□□□□□ -1.5
VPS13D-207ENST00000476169 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SPDYE3A6NKU9 549 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 DIAPH1O60610 1272 aaKnown RBP5.69□□□□□ -1.5
VPS13D-207ENST00000476169 PEX14O75381 377 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 ADH5P11766 374 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 NTF4P34130 210 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SLC7A5Q01650 507 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 C2orf27AQ580R0 203 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 KIAA1211LQ6NV74 962 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SPATC1Q76KD6 591 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 DYMQ7RTS9 669 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 MRPL41Q8IXM3 137 aaKnown RBP5.69□□□□□ -1.5
VPS13D-207ENST00000476169 EXOC8Q8IYI6 725 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SLFN12Q8IYM2 578 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 PHACTR4Q8IZ21 702 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SMG8Q8ND04 991 aaKnown RBP5.69□□□□□ -1.5
VPS13D-207ENST00000476169 THAP3Q8WTV1 239 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-207ENST00000476169 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-207ENST00000476169 TRIM11Q96F44 468 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 SUGCTQ9HAC7 445 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 FBRSQ9HAH7 460 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 PIDD1Q9HB75 910 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 ZMYM5Q9UJ78 669 aa5.69□□□□□ -1.5
VPS13D-207ENST00000476169 LOC102724159A0A0B4J2E5 919 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 MAP4K4O95819 1239 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 HCLS1P14317 486 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 CCNFP41002 786 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms