RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PKN1Q16512 942 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 CNBD1Q8NA66 436 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 CACTINQ8WUQ7 758 aaKnown RBP19.18■□□□□ 0.66
TVP23B-202ENST00000476139 C16orf45Q96MC5 204 aaPredicted RBP19.18■□□□□ 0.66
TVP23B-202ENST00000476139 MYH2Q9UKX2 1941 aa19.18■□□□□ 0.66
TVP23B-202ENST00000476139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
TVP23B-202ENST00000476139 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
TVP23B-202ENST00000476139 LONRF3Q496Y0 759 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 JMYQ8N9B5 988 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
TVP23B-202ENST00000476139 CABP5Q9NP86 173 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 ECM29Q5VYK3 1845 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 FUT2Q10981 343 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 RESP18Q5W5W9 173 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 TPM3P06753 285 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 USP17L8P0C7I0 530 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 PNOCQ13519 176 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 SARM1Q6SZW1 724 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 CATIPQ7Z7H3 387 aa19.17■□□□□ 0.66
TVP23B-202ENST00000476139 DZIP1Q86YF9 867 aaKnown RBP19.17■□□□□ 0.66
TVP23B-202ENST00000476139 FOXP1Q9H334 677 aaPredicted RBP19.17■□□□□ 0.66
TVP23B-202ENST00000476139 GRAPQ13588 217 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 DIXDC1Q155Q3 683 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 EARS2Q5JPH6 523 aaKnown RBP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 GRAPLQ8TC17 118 aaPredicted RBP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 SPATA31A6Q5VVP1 1343 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 RIOK3O14730 519 aaKnown RBP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 RCAN1P53805 252 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
TVP23B-202ENST00000476139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
TVP23B-202ENST00000476139 FOXP4Q8IVH2 680 aaPredicted RBP19.15■□□□□ 0.66
TVP23B-202ENST00000476139 RNF26Q9BY78 433 aaPredicted RBP19.15■□□□□ 0.66
TVP23B-202ENST00000476139 KCNH3Q9ULD8 1083 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 FOXN1O15353 648 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 AKAP17AQ02040 695 aaKnown RBP19.15■□□□□ 0.66
TVP23B-202ENST00000476139 PRR5LQ6MZQ0 368 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
TVP23B-202ENST00000476139 ATP8A2Q9NTI2 1148 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 AFF2P51816 1311 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 MYH13Q9UKX3 1938 aa19.15■□□□□ 0.66
TVP23B-202ENST00000476139 ZNF710Q8N1W2 664 aa19.14■□□□□ 0.66
TVP23B-202ENST00000476139 DUOX1Q9NRD9 1551 aa19.14■□□□□ 0.66
TVP23B-202ENST00000476139 PDS5AQ29RF7 1337 aaKnown RBP19.14■□□□□ 0.66
TVP23B-202ENST00000476139 CUTAO60888 179 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 NLRP12P59046 1061 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
TVP23B-202ENST00000476139 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.65
TVP23B-202ENST00000476139 THSD7AQ9UPZ6 1657 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 COL24A1Q17RW2 1714 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
TVP23B-202ENST00000476139 NOM1Q5C9Z4 860 aaKnown RBP19.14■□□□□ 0.65
TVP23B-202ENST00000476139 RILPL1Q5EBL4 403 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 METTL16Q86W50 562 aaKnown RBP19.14■□□□□ 0.65
TVP23B-202ENST00000476139 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
TVP23B-202ENST00000476139 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
TVP23B-202ENST00000476139 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
TVP23B-202ENST00000476139 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
TVP23B-202ENST00000476139 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
TVP23B-202ENST00000476139 NHSQ6T4R5 1651 aa19.13■□□□□ 0.65
TVP23B-202ENST00000476139 USP49Q70CQ1 688 aa19.13■□□□□ 0.65
TVP23B-202ENST00000476139 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
TVP23B-202ENST00000476139 FBXO2Q9UK22 296 aaPredicted RBP19.13■□□□□ 0.65
TVP23B-202ENST00000476139 BAZ2BQ9UIF8 2168 aaKnown RBP19.13■□□□□ 0.65
TVP23B-202ENST00000476139 FAM237AA0A1B0GTK4 181 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 TSPY2A6NKD2 308 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 PPP2R5BQ15173 497 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 CNNM3Q8NE01 707 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 WNT7AO00755 349 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 PRPF3O43395 683 aaKnown RBP19.12■□□□□ 0.65
TVP23B-202ENST00000476139 ORC4O43929 436 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 GYS1P13807 737 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 GPSM2P81274 684 aa19.12■□□□□ 0.65
TVP23B-202ENST00000476139 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 PTPREP23469 700 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 CDC25BP30305 580 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 NCAPHQ15003 741 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 ZNF592Q92610 1267 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 PHF20Q9BVI0 1012 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 ARPP21Q9UBL0 812 aaPredicted RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 TUBE1Q9UJT0 475 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 ONECUT3O60422 494 aaPredicted RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 KRBA2Q6ZNG9 492 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 PDILTQ8N807 584 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 XDHP47989 1333 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 POLR2DO15514 142 aaKnown RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 USP5P45974 858 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 SPTY2D1Q68D10 685 aaPredicted RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 RCSD1Q6JBY9 416 aa19.11■□□□□ 0.65
TVP23B-202ENST00000476139 RPGRQ92834 1020 aaKnown RBP19.11■□□□□ 0.65
TVP23B-202ENST00000476139 PDE4BQ07343 736 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 SBK1Q52WX2 424 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms