RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 THUMPD2Q9BTF0 503 aaKnown RBP8.45□□□□□ -1.06
COL11A1-209ENST00000475980 ISCA1Q9BUE6 129 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL11A1-209ENST00000475980 TTYH1Q9H313 450 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-209ENST00000475980 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 CPA4Q9UI42 421 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 SPEF2Q9C093 1822 aa8.45□□□□□ -1.06
COL11A1-209ENST00000475980 FLT3LGP49771 235 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 SMAD3P84022 425 aaKnown RBP8.44□□□□□ -1.06
COL11A1-209ENST00000475980 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
COL11A1-209ENST00000475980 PPIL2Q13356 520 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 TTLL5Q6EMB2 1281 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 ERO1BQ86YB8 467 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 USP38Q8NB14 1042 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 TEPSINQ96N21 525 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 P2RX7Q99572 595 aaKnown RBP8.44□□□□□ -1.06
COL11A1-209ENST00000475980 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 GABRQQ9UN88 632 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 PFASO15067 1338 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 MYH3P11055 1940 aa8.44□□□□□ -1.06
COL11A1-209ENST00000475980 IRS4O14654 1257 aaPredicted RBP8.43□□□□□ -1.06
COL11A1-209ENST00000475980 IRF6O14896 467 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 ITGB2P05107 769 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 ELNP15502 786 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 GCGRP47871 477 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 CCDC152Q4G0S7 254 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 XAGE3Q8WTP9 111 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 ASB2Q96Q27 587 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
COL11A1-209ENST00000475980 OGDHLQ9ULD0 1010 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 SNCAIPQ9Y6H5 919 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 USP34Q70CQ2 3546 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 REV3LO60673 3130 aa8.43□□□□□ -1.06
COL11A1-209ENST00000475980 CLRN2A0PK11 232 aa8.42□□□□□ -1.06
COL11A1-209ENST00000475980 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
COL11A1-209ENST00000475980 COL6A1P12109 1028 aa8.42□□□□□ -1.06
COL11A1-209ENST00000475980 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-209ENST00000475980 PRMT6Q96LA8 375 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-209ENST00000475980 PARK7Q99497 189 aaKnown RBP8.42□□□□□ -1.06
COL11A1-209ENST00000475980 VEZTQ9HBM0 779 aa8.42□□□□□ -1.06
COL11A1-209ENST00000475980 CHD9Q3L8U1 2897 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 FRMPD3Q5JV73 1810 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 PDHXO00330 501 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 CCT4P50991 539 aaKnown RBP8.41□□□□□ -1.06
COL11A1-209ENST00000475980 FKBP1AP62942 108 aaKnown RBP8.41□□□□□ -1.06
COL11A1-209ENST00000475980 PPATQ06203 517 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 ALYREFQ86V81 257 aaKnown RBP8.41□□□□□ -1.06
COL11A1-209ENST00000475980 ANKRD18AQ8IVF6 992 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
COL11A1-209ENST00000475980 LBHD1Q9BQE6 289 aaPredicted RBP8.41□□□□□ -1.06
COL11A1-209ENST00000475980 LRFN3Q9BTN0 628 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 THEGQ9P2T0 379 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 LEMD3Q9Y2U8 911 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 WDFY4Q6ZS81 3184 aa8.41□□□□□ -1.06
COL11A1-209ENST00000475980 AOX1Q06278 1338 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 HMGCRP04035 888 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 ANXA1P04083 346 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 TIMP2P16035 220 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 EIF4G2P78344 907 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL11A1-209ENST00000475980 GTF2IP78347 998 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 MOGSQ13724 837 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 TXNRD3Q86VQ6 643 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 CERS5Q8N5B7 392 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 PLBD2Q8NHP8 589 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 PCDHAC2Q9Y5I4 1007 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 PTPRFP10586 1907 aa8.4□□□□□ -1.06
COL11A1-209ENST00000475980 AK9Q5TCS8 1911 aa8.39□□□□□ -1.07
COL11A1-209ENST00000475980 TNPO2O14787 897 aaKnown RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 WDR4P57081 412 aaKnown RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 MRPS5P82675 430 aaKnown RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 AIMP1Q12904 312 aaKnown RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 NNTQ13423 1086 aa8.39□□□□□ -1.07
COL11A1-209ENST00000475980 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
COL11A1-209ENST00000475980 ZBTB38Q8NAP3 1195 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 DAXXQ9UER7 740 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-209ENST00000475980 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
COL11A1-209ENST00000475980 CFAP54Q96N23 3096 aa8.39□□□□□ -1.07
COL11A1-209ENST00000475980 A0A1B0GUL6 1792 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 PDE8AO60658 829 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 ADH1CP00326 375 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 MRE11P49959 708 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 LRRC26Q2I0M4 334 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 AKNAD1Q5T1N1 836 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
COL11A1-209ENST00000475980 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-209ENST00000475980 CHD7Q9P2D1 2997 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
COL11A1-209ENST00000475980 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
COL11A1-209ENST00000475980 TCF20Q9UGU0 1960 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms